RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 NEU3Q9UQ49 428 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 ZBBXA8MT70 800 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 HACD1B0YJ81 288 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 GOLGA8KD6RF30 607 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 PAGE1O75459 146 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 ABLIM3O94929 683 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 SEC24AO95486 1093 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 SHBGP04278 402 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 VAV1P15498 845 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 PSEN1P49768 467 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 BZW1Q7L1Q6 419 aaKnown RBP26.46■■□□□ 1.83
CPNE1-205ENST00000401607 HOOK3Q86VS8 718 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 GOLGA6L1Q8N7Z2 621 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 BADQ92934 168 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 SLC39A13Q96H72 371 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 LRRC4CQ9HCJ2 640 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 TLR8Q9NR97 1041 aaKnown RBP26.46■■□□□ 1.83
CPNE1-205ENST00000401607 VPS18Q9P253 973 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 PAK5Q9P286 719 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 TCRBV7S3A2A0A539 114 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 KCNU1A8MYU2 1149 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 ZDHHC11BP0C7U3 371 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 TUFMP49411 452 aaKnown RBP26.46■■□□□ 1.83
CPNE1-205ENST00000401607 PPIGQ13427 754 aaKnown RBP eCLIP26.46■■□□□ 1.835e-12■■□□□ 13.5
CPNE1-205ENST00000401607 ARTNQ5T4W7 220 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 TP53INP2Q8IXH6 220 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 ZNF461Q8TAF7 563 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 TFB1MQ8WVM0 346 aaKnown RBP26.46■■□□□ 1.83
CPNE1-205ENST00000401607 CEP295NLQ96MC4 621 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 RBM15Q96T37 977 aaKnown RBP eCLIP26.46■■□□□ 1.832e-7■■■□□ 15.1
CPNE1-205ENST00000401607 TLR6Q9Y2C9 796 aa26.46■■□□□ 1.83
CPNE1-205ENST00000401607 CARNS1A5YM72 827 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 FGBP02675 491 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 HTRA4P83105 476 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-205ENST00000401607 GAD2Q05329 585 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 PRKD1Q15139 912 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-205ENST00000401607 NPWQ8N729 165 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 FCRL2Q96LA5 508 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-205ENST00000401607 LGMNQ99538 433 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 TMBIM4Q9HC24 238 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 NINJ2Q9NZG7 142 aa26.45■■□□□ 1.82
CPNE1-205ENST00000401607 TMEM63AO94886 807 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 GJB5O95377 273 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 URODP06132 367 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 LINC00271P0C7V0 271 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 EPHB2P29323 1055 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 EIF3BP55884 814 aaKnown RBP26.44■■□□□ 1.82
CPNE1-205ENST00000401607 BASP1P80723 227 aaKnown RBP26.44■■□□□ 1.82
CPNE1-205ENST00000401607 CCDC110Q8TBZ0 833 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 HSFX1Q9UBD0 423 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 XPO7Q9UIA9 1087 aaKnown RBP26.44■■□□□ 1.82
CPNE1-205ENST00000401607 NR2E3Q9Y5X4 410 aa26.44■■□□□ 1.82
CPNE1-205ENST00000401607 TBX18O95935 607 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 ACTN2P35609 894 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 GYS2P54840 703 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 FPGSQ05932 587 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 EFEMP1Q12805 493 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 MANEALQ5VSG8 457 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 TPGS2Q68CL5 300 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 HEATR6Q6AI08 1181 aaKnown RBP26.43■■□□□ 1.82
CPNE1-205ENST00000401607 CEP128Q6ZU80 1094 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 VPS52Q8N1B4 723 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 HTR3CQ8WXA8 447 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 AUTS2Q8WXX7 1259 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 SIK2Q9H0K1 926 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 PRDM12Q9H4Q4 367 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 TMEM51Q9NW97 253 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 MAGED2Q9UNF1 606 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-205ENST00000401607 GOLGA8MH3BSY2 632 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 GCATO75600 419 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 TTC4O95801 387 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 TBX4P57082 545 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 KCNJ11Q14654 390 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 PDK1Q15118 436 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 KYNUQ16719 465 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 UHMK1Q8TAS1 419 aaKnown RBP26.43■■□□□ 1.82
CPNE1-205ENST00000401607 OLA1Q9NTK5 396 aaKnown RBP26.43■■□□□ 1.82
CPNE1-205ENST00000401607 CXXC1Q9P0U4 656 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-205ENST00000401607 PRKAG2Q9UGJ0 569 aa26.43■■□□□ 1.82
CPNE1-205ENST00000401607 C5orf60A6NFR6 353 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 ACSL3O95573 720 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 HOXC13P31276 330 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 PPM1AP35813 382 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 RAB33AQ14088 237 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 UBE2OQ9C0C9 1292 aaKnown RBP26.42■■□□□ 1.82
CPNE1-205ENST00000401607 SAYSD1Q9NPB0 183 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 RAB6BQ9NRW1 208 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 RAD54BQ9Y620 910 aa26.42■■□□□ 1.82
CPNE1-205ENST00000401607 SMAPO00193 183 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 MOCS2O96007 188 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-205ENST00000401607 DNAJB2P25686 324 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 MAGEA4P43358 317 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 IFFO1Q0D2I5 559 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 PDZD4Q76G19 769 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-205ENST00000401607 C9orf72Q96LT7 481 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 CYP4F11Q9HBI6 524 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 HS3ST4Q9Y661 456 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 PPP1R12AO14974 1030 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-205ENST00000401607 CHADO15335 359 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 MYZAPP0CAP1 466 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms