RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 F8W810 466 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CHADO15335 359 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ITGB1P05556 798 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LINC00271P0C7V0 271 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LAG3P18627 525 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GPD2P43304 727 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ORC1Q13415 861 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TAF5Q15542 800 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FAM109BQ6ICB4 259 aaPredicted RBP16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 KCNT2Q6UVM3 1135 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LIMS2Q7Z4I7 341 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TCP10LQ8TDR4 215 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SAR1AQ9NR31 198 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 HMGXB4Q9UGU5 601 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 KIAA1257Q9ULG3 409 aa16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TRAFD1O14545 582 aaPredicted RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TARSP26639 723 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 RABGGTBP53611 331 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CDH6P55285 790 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 KCNJ11Q14654 390 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TIGD5Q53EQ6 642 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 NLRP9Q7RTR0 991 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ZNF276Q8N554 614 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 NSMCE1Q8WV22 266 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 UTP4Q969X6 686 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ZNF558Q96NG5 402 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PEBP4Q96S96 227 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ADAM33Q9BZ11 813 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PRO3102Q9H379 93 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 MARCH5Q9NX47 278 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ADAM28Q9UKQ2 775 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CHMP2BQ9UQN3 213 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 IKBKGQ9Y6K9 419 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 RANBP2P49792 3224 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 GRXCR1A8MXD5 290 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 M0QZQ0 153 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TADA2AO75478 443 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 FAM163BP0C2L3 166 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PBX3P40426 434 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ELK3P41970 407 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SOWAHAQ2M3V2 549 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SPOUT1Q5T280 376 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CHSY1Q86X52 802 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TDHQ8IZJ6 230 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TAB3Q8N5C8 712 aaPredicted RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TOP6BLQ8N6T0 577 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 COLGALT1Q8NBJ5 622 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SLC44A1Q8WWI5 657 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 APOPT1Q96IL0 206 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SUSD3Q96L08 255 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SENP8Q96LD8 212 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 MANSC1Q9H8J5 431 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 NPHS2Q9NP85 383 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PAK5Q9P286 719 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ZFP69BQ9UJL9 534 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 HAO1Q9UJM8 370 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 BARX2Q9UMQ3 279 aaPredicted RBP16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PCDHA11Q9Y5I1 949 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TEX264Q9Y6I9 313 aa16.45■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PDE4DIPQ5VU43 2346 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CFAP69A5D8W1 941 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 C2CD4BA6NLJ0 364 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 NT5C1B-RDH14C9J2C7 533 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CYB561D2O14569 222 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PRPSAP2O60256 369 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 EFEMP2O95967 443 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 NEK3P51956 506 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SLC18A2Q05940 514 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 INCA1Q0VD86 236 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PDK2Q15119 407 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TMEM173Q86WV6 379 aaPredicted RBP16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 MAP7D3Q8IWC1 876 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SLC39A11Q8N1S5 342 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 IGSF21Q96ID5 467 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ANKRD27Q96NW4 1050 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PNPLA8Q9NP80 782 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 LNPEPQ9UIQ6 1025 aa16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 RPL26L1Q9UNX3 145 aaKnown RBP16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 LAMA2P24043 3122 aaKnown RBP16.44■□□□□ 0.22
CHRFAM7A-203ENST00000401522 TCRBV9S1A1TA0A576 114 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 H7C0C1 242 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 LPXNO60711 386 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 HUS1O60921 280 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 INHBAP08476 426 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 DHRS4L1P0CG22 281 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 T-ENOLP0DO92 83 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 PDGFRAP16234 1089 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 BRCC3P46736 316 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 ATP5OP48047 213 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 CCNG1P51959 295 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 SLC8A3P57103 927 aa16.43■□□□□ 0.22
CHRFAM7A-203ENST00000401522 MMRN1Q13201 1228 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms