RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RCOR2Q8IZ40 523 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 FAM71DQ8N9W8 422 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 SPATA18Q8TC71 538 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 IGSF8Q969P0 613 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 RNF157Q96PX1 679 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 SEPT10Q9P0V9 454 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 DNMT3BQ9UBC3 853 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 FBXW11Q9UKB1 542 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 ZNF148Q9UQR1 794 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 HS3ST4Q9Y661 456 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 CLASP2O75122 1294 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 PIAS1O75925 651 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 LRG1P02750 347 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 COILP38432 576 aaPredicted RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 NADSYN1Q6IA69 706 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 USP33Q8TEY7 942 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 MAK16Q9BXY0 300 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 TLR8Q9NR97 1041 aaKnown RBP12.1□□□□□ -0.47
SKA3-203ENST00000400018 STIM2Q9P246 746 aa12.1□□□□□ -0.47
SKA3-203ENST00000400018 CCDC195A0A1B0GUA6 201 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 ANTXRLA6NF34 631 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 KCNK1O00180 336 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 EEF2KO00418 725 aaKnown RBP12.09□□□□□ -0.47
SKA3-203ENST00000400018 GJB3O75712 270 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 ADH1AP07327 375 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 ERCC2P18074 760 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 SLC6A4P31645 630 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 TBX4P57082 545 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 DR1Q01658 176 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 STRADAQ7RTN6 431 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 PPM1EQ8WY54 764 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 FBXO44Q9H4M3 255 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 LRRC4CQ9HCJ2 640 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 TTLL3Q9Y4R7 772 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 ATG2AQ2TAZ0 1938 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 SGK1O00141 431 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 LPXNO60711 386 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 RBL1P28749 1068 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 CXCR3P49682 368 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 CLCN6P51797 869 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 SNX16P57768 344 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 RPS24P62847 133 aaKnown RBP12.09□□□□□ -0.47
SKA3-203ENST00000400018 TEAD2Q15562 447 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 NCBP2-AS2Q69YL0 99 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 BNIPLQ7Z465 357 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 JAMLQ86YT9 394 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 TLE6Q9H808 572 aa12.09□□□□□ -0.47
SKA3-203ENST00000400018 PATJQ8NI35 1801 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 H7C0C1 242 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 CKMP06732 381 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 MBL2P11226 248 aaPredicted RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 PTGIRP43119 386 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 ATP5OP48047 213 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 EPHB3P54753 998 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 EFHC2Q5JST6 749 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 PPM1LQ5SGD2 360 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 ARTNQ5T4W7 220 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 TPGS1Q6ZTW0 290 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 TCEAL8Q8IYN2 117 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 CCNYQ8ND76 341 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 TTC8Q8TAM2 541 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 RBM41Q96IZ5 413 aaKnown RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 RXFP1Q9HBX9 757 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 CYLDQ9NQC7 956 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 ANAPC1Q9H1A4 1944 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 ATG2BQ96BY7 2078 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 H3BNC9 293 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 SOX1O00570 391 aaPredicted RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 LIASO43766 372 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 PHF2O75151 1096 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 IGLV3-25P01717 112 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 F11P03951 625 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 RBP3P10745 1247 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 TPI1P60174 286 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 EIF3EP60228 445 aaKnown RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 DHX9Q08211 1270 aaKnown RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 HLTFQ14527 1009 aaKnown RBP eCLIP12.08□□□□□ -0.48
SKA3-203ENST00000400018 PPP1R7Q15435 360 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
SKA3-203ENST00000400018 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 PSMG2Q969U7 264 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 SLC46A2Q9BY10 475 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
SKA3-203ENST00000400018 KLC2Q9H0B6 622 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms