RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ATXN2Q99700 1313 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 AP5Z1O43299 807 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 CAV1Q03135 178 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM46CQ5VWP2 391 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 HELQQ8TDG4 1101 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 EDEM1Q92611 657 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ARHGEF26Q96DR7 871 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 PLAAQ9Y263 795 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 MYOM1P52179 1685 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 APLP1P51693 650 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ERVK-21P61565 698 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 P4HA3Q7Z4N8 544 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 PRPF39Q86UA1 669 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 SLC35C2Q9NQQ7 365 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 IARS2Q9NSE4 1012 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ENTPD4Q9Y227 616 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 PCDHA11Q9Y5I1 949 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 SNPHO15079 494 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 RTN2O75298 545 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 STXBP1P61764 594 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 PLGLB1Q02325 96 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 CD302Q8IX05 232 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 KLHL28Q9NXS3 571 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 TECPR2O15040 1411 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 GTPBP1O00178 669 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 IDH3BO43837 385 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 HMGCRP04035 888 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 MMEP08473 750 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 MAPK1P28482 360 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 PPM1AP35813 382 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 DGKEP52429 567 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 KLC1Q07866 573 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 CCNG2Q16589 344 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 FBXL16Q8N461 479 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 PRKAG3Q9UGI9 489 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 VWDEQ8N2E2 1590 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 DEAF1O75398 565 aaPredicted RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 NR1I3Q14994 352 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ARMC4Q5T2S8 1044 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 TNIP2Q8NFZ5 429 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 NIF3L1Q9GZT8 377 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 TMCC3Q9ULS5 477 aa11.23□□□□□ -0.61
CACNA1C-216ENST00000399638 ZC3H13Q5T200 1668 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 H3BM21 787 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CCNB2O95067 398 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 SERPINB10P48595 397 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 IRAK1P51617 712 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 XRRA1Q6P2D8 792 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 USP45Q70EL2 814 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 ARMCX6Q7L4S7 300 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 ISM1B1AKI9 464 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 HDCP19113 662 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 PPP2R1BP30154 601 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 PRCPP42785 496 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CASP6P55212 293 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 RUNX1T1Q06455 604 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 ORC2Q13416 577 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 PROSER1Q86XN7 944 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 PDE2AO00408 941 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 SH3BGRLO75368 114 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 FSBPO95073 299 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 HSMCR30P0CW71 290 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 NCK1P16333 377 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 PRLRP16471 622 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 TLX1P31314 330 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 TKTL1P51854 596 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 ITPK1Q13572 414 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 ACER1Q8TDN7 264 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CASP10Q92851 521 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CYFIP2Q96F07 1278 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 LRRC46Q96FV0 321 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 FICDQ9BVA6 458 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 SH3BP4Q9P0V3 963 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CDYLQ9Y232 598 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 RWDD3Q9Y3V2 267 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CCNT2O60583 730 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 GYS2P54840 703 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 TRAP1Q12931 704 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 SMU1Q2TAY7 513 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 TAF2Q6P1X5 1199 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms