RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NAT9Q9BTE0 207 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 ZYG11BQ9C0D3 744 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 CFAP97Q9P2B7 532 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 PADI4Q9UM07 663 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 SNX5Q9Y5X3 404 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 SPAG7O75391 227 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 IFNA14P01570 189 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 RBP3P10745 1247 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 AKT2P31751 481 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 SLC8A1P32418 973 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 GAD2Q05329 585 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 ACAP1Q15027 740 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 TATDN1Q6P1N9 297 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 ILDR2Q71H61 639 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 FAM131BQ86XD5 332 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 TKTL2Q9H0I9 626 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 ING2Q9H160 280 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 GSNP06396 782 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 ENO2P09104 434 aaPredicted RBP8.15□□□□□ -1.11
USP47-203ENST00000399455 ACRP10323 421 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 PTPN7P35236 360 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 SKOR1P84550 965 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 OTOAQ7RTW8 1153 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 SLC9A7Q96T83 725 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 HPS5Q9UPZ3 1129 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 RFC1P35251 1148 aaPredicted RBP8.15□□□□□ -1.11
USP47-203ENST00000399455 PIK3CGP48736 1102 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 SARSP49591 514 aaKnown RBP8.15□□□□□ -1.11
USP47-203ENST00000399455 ELP6Q0PNE2 266 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 PTAR1Q7Z6K3 402 aaPredicted RBP8.15□□□□□ -1.11
USP47-203ENST00000399455 GRID1Q9ULK0 1009 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 ADAMTSL3P82987 1691 aa8.15□□□□□ -1.11
USP47-203ENST00000399455 NALCNQ8IZF0 1738 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 GNG14A0A1W2PPG7 69 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 M0R3G1 203 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 CYP3A5P20815 502 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 RPA3P35244 121 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 ACLYP53396 1101 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ZNHIT3Q15649 155 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 AASDHQ4L235 1098 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 BTNL9Q6UXG8 535 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 PHYKPLQ8IUZ5 450 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 RIBC1Q8N443 379 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 ZNF614Q8N883 585 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 STARD8Q92502 1023 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ERLEC1Q96DZ1 483 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 TMEM175Q9BSA9 504 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 MRPL1Q9BYD6 325 aaKnown RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 USP20Q9Y2K6 914 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 SNRPAP09012 282 aaKnown RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 LSP1P33241 339 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 RHBDL3P58872 404 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 EOGTQ5NDL2 527 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 C6orf10Q5SRN2 563 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 FBXO46Q6PJ61 603 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 SLC22A9Q8IVM8 553 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 KIAA0319LQ8IZA0 1049 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 TRIML2Q8N7C3 387 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ZNF555Q8NEP9 628 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ZNF333Q96JL9 665 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 WWP1Q9H0M0 922 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 SLC27A5Q9Y2P5 690 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 A0A1W2PQ67 120 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ZBTB14O43829 449 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ACSL4O60488 711 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 TAL1P17542 331 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 CNTFP26441 200 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 PPP2R1BP30154 601 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 NOS2P35228 1153 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 PSMD8P48556 350 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ICE2Q659A1 982 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 VSTM1Q6UX27 236 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 BEND7Q8N7W2 519 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP47-203ENST00000399455 DCDC2Q9UHG0 476 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 RBP1P09455 135 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 SPATA31D3P0C874 917 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ARFIP2P53365 341 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 CASP7P55210 303 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 BTKQ06187 659 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 MAD2L1Q13257 205 aaPredicted RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 C16orf89Q6UX73 402 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 SPATA31D4Q6ZUB0 917 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ACDQ96AP0 544 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 VAT1Q99536 393 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 KCTD10Q9H3F6 313 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ENTPD4Q9Y227 616 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 GTPBP10A4D1E9 387 aaKnown RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 FOXN1O15353 648 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ERBB2P04626 1255 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 SEC13P55735 322 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 TMEM164Q5U3C3 297 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 LRRC49Q8IUZ0 686 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 REXO5Q96IC2 774 aaKnown RBP8.14□□□□□ -1.11
USP47-203ENST00000399455 RBM15Q96T37 977 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP47-203ENST00000399455 KCTD5Q9NXV2 234 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 ADAM28Q9UKQ2 775 aa8.14□□□□□ -1.11
USP47-203ENST00000399455 PADI3Q9ULW8 664 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms