RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 WDR5BQ86VZ2 330 aa26.45■■□□□ 1.82
U2AF1-203ENST00000398137 FAM204AQ9H8W3 233 aa26.45■■□□□ 1.82
U2AF1-203ENST00000398137 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.45■■□□□ 1.82
U2AF1-203ENST00000398137 CNOT8Q9UFF9 292 aaKnown RBP26.45■■□□□ 1.82
U2AF1-203ENST00000398137 SOWAHDA6NJG2 315 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 NFATC1O95644 943 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 MYBL1P10243 752 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 CHRM1P11229 460 aaPredicted RBP26.44■■□□□ 1.82
U2AF1-203ENST00000398137 KRT3P12035 628 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 SERPINB11Q96P15 392 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 MCEEQ96PE7 176 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 MYO1AQ9UBC5 1043 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 SH3BP1Q9Y3L3 701 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 HBS1LQ9Y450 684 aaKnown RBP26.44■■□□□ 1.82
U2AF1-203ENST00000398137 CEP250Q9BV73 2442 aa26.44■■□□□ 1.82
U2AF1-203ENST00000398137 STC2O76061 302 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 TRUB2O95900 331 aaKnown RBP26.43■■□□□ 1.82
U2AF1-203ENST00000398137 NOS2P35228 1153 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 SULT1E1P49888 294 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 COG7P83436 770 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 DHCR24Q15392 516 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 PLEKHA7Q6IQ23 1121 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 RHBDF2Q6PJF5 856 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 TMTC1Q8IUR5 882 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 SFTPA1Q8IWL2 248 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 ANP32BQ92688 251 aaKnown RBP26.43■■□□□ 1.82
U2AF1-203ENST00000398137 BAG1Q99933 345 aaPredicted RBP26.43■■□□□ 1.82
U2AF1-203ENST00000398137 PACSIN1Q9BY11 444 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 THAP2Q9H0W7 228 aa26.43■■□□□ 1.82
U2AF1-203ENST00000398137 SYNJ2BP-COX16A0A087WUM0 186 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 SIGLEC16A6NMB1 481 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 K7EQS6 105 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 TFE3P19532 575 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-203ENST00000398137 GALCP54803 685 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 MAMLD1Q13495 774 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 SIM2Q14190 667 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-203ENST00000398137 TRIP4Q15650 581 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-203ENST00000398137 FBXO43Q4G163 708 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 OTUD1Q5VV17 481 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-203ENST00000398137 PRR23BQ6ZRT6 265 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 ARCQ7LC44 396 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 C12orf40Q86WS4 652 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 TMEM139Q8IV31 216 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 RPLP0P6Q8NHW5 317 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 PLD4Q96BZ4 506 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 CFAP57Q96MR6 1250 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 PARVAQ9NVD7 372 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 DDIT4Q9NX09 232 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 COX16Q9P0S2 106 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 LSM7Q9UK45 103 aaKnown RBP26.42■■□□□ 1.82
U2AF1-203ENST00000398137 STAP1Q9ULZ2 295 aa26.42■■□□□ 1.82
U2AF1-203ENST00000398137 IRAK2O43187 625 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 ATG13O75143 517 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 IGLV3-25P01717 112 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 CNR2P34972 360 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 RFC1P35251 1148 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-203ENST00000398137 SLC6A11P48066 632 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 TBX4P57082 545 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 NR1H3Q13133 447 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 PPP1R15BQ5SWA1 713 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 LAIR1Q6GTX8 287 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 DCUN1D2Q6PH85 259 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 CCDC170Q8IYT3 715 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 RXFP2Q8WXD0 754 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 TBCBQ99426 244 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 NPY6RQ99463 290 aa26.41■■□□□ 1.82
U2AF1-203ENST00000398137 E2F8A0AVK6 867 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 C2CD4BA6NLJ0 364 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 M0QYT0 321 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 GREM1O60565 184 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 H2AFZP0C0S5 128 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 PDGFRAP16234 1089 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 CORO1AP31146 461 aaKnown RBP26.4■■□□□ 1.82
U2AF1-203ENST00000398137 CYLC1P35663 651 aaPredicted RBP26.4■■□□□ 1.82
U2AF1-203ENST00000398137 RPL7AP62424 266 aaKnown RBP26.4■■□□□ 1.82
U2AF1-203ENST00000398137 NME3Q13232 169 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 RAD9BQ6WBX8 426 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 H2AFVQ71UI9 128 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 ARHGEF26Q96DR7 871 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 ADAM33Q9BZ11 813 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 DLL3Q9NYJ7 618 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 TLR6Q9Y2C9 796 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 SCINQ9Y6U3 715 aa26.4■■□□□ 1.82
U2AF1-203ENST00000398137 ANKRD62A6NC57 917 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 IGLV3-27P01718 113 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 KLKB1P03952 638 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 GPD1P21695 349 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 SDC4P31431 198 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 NNTQ13423 1086 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 SLC25A52Q3SY17 297 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 SYT13Q7L8C5 426 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 BBS7Q8IWZ6 715 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 FCRL2Q96LA5 508 aaPredicted RBP26.39■■□□□ 1.82
U2AF1-203ENST00000398137 HHIPQ96QV1 700 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 RRN3Q9NYV6 651 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 CALCOCO1Q9P1Z2 691 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 SLC8A2Q9UPR5 921 aa26.39■■□□□ 1.82
U2AF1-203ENST00000398137 SPAG17Q6Q759 2223 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 CCDC163A0A0D9SF12 145 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 SLC9A3R1O14745 358 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms