RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 MAPK7Q13164 816 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 MPP3Q13368 585 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 BPIFA1Q9NP55 256 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 hCG_2014768A0A024R1R8 64 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 FLT3LGP49771 235 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 ZNF571Q7Z3V5 609 aaPredicted RBP11.63□□□□□ -0.55
TTC28-201ENST00000397906 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 EXO5Q9H790 373 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 DNMT3LQ9UJW3 386 aa11.63□□□□□ -0.55
TTC28-201ENST00000397906 GAKO14976 1311 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 GLRA3O75311 464 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 SNAP47Q5SQN1 464 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 CATSPER1Q8NEC5 780 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 TYMPP19971 482 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 TARSP26639 723 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 NFYCQ13952 458 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 USP45Q70EL2 814 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 SETD3Q86TU7 594 aaPredicted RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 RUBCNQ92622 972 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 ATP5C1P36542 298 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 EARS2Q5JPH6 523 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 CASKIN2Q8WXE0 1202 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 DRG1Q9Y295 367 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 CNBD2Q96M20 576 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 ZIM3Q96PE6 472 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 ZCCHC2Q9C0B9 1178 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 EML1O00423 815 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 KRT8P05787 483 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 ATP6V1B2P21281 511 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 E9PBE3 544 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 KLHL41O60662 606 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 HDCP19113 662 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 RRM2P31350 389 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 LRRC8BQ6P9F7 803 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 CYP4X1Q8N118 509 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 MYCBPQ99417 103 aaPredicted RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 IDI2Q9BXS1 227 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 ABCC13Q9NSE7 274 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 KBTBD4Q9NVX7 518 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 KDM4FA0A1W2PPD8 638 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 LZTS1Q9Y250 596 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 MTO1Q9Y2Z2 717 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 NOS3P29474 1203 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 C21orf59P57076 290 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 ARMC12Q5T9G4 340 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 POTEAQ6S8J7 498 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 NOA1Q8NC60 698 aaKnown RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 RGS18Q9NS28 235 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 TBL1XO60907 577 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 MMP13P45452 471 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 TRIP4Q15650 581 aaPredicted RBP11.62□□□□□ -0.55
TTC28-201ENST00000397906 TRIM69Q86WT6 500 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 MAB21L3Q8N8X9 362 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 COL26A1Q96A83 441 aa11.62□□□□□ -0.55
TTC28-201ENST00000397906 S100A5P33763 92 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 NR6A1Q15406 480 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 TRIP10Q15642 601 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 RAET1GQ6H3X3 334 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 CCDC126Q96EE4 140 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 TBL1YQ9BQ87 522 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 SLC28A3Q9HAS3 691 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 POPDC2Q9HBU9 364 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 MGAT1P26572 445 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 NACC2Q96BF6 587 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 PAFAH2Q99487 392 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 ULBP1Q9BZM6 244 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 XPO1O14980 1071 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 USP12O75317 370 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 CXCL14O95715 111 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 TRAF2Q12933 501 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 PABPC1LQ4VXU2 614 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 KIAA0895Q8NCT3 520 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 ISCUQ9H1K1 167 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 DEPDC5O75140 1603 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 MCOLN2Q8IZK6 566 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 PPP1R37O75864 691 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 VAPBO95292 243 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 LUZP2Q86TE4 346 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 RIBC1Q8N443 379 aaPredicted RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 TDRD5Q8NAT2 981 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 BUD23O43709 281 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 PSMA4P25789 261 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 SERPINA4P29622 427 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 TERF2Q15554 542 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 FGD2Q7Z6J4 655 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 KCNMB4Q86W47 210 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 NCAM2O15394 837 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 PROSCO94903 275 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 COPAP53621 1224 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
TTC28-201ENST00000397906 CCT8L2Q96SF2 557 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 TM6SF2Q9BZW4 377 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 PPCSQ9HAB8 311 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 ZNF23P17027 643 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 SERPINB10P48595 397 aa11.61□□□□□ -0.55
TTC28-201ENST00000397906 COLGALT2Q8IYK4 626 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms