RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MAP7D3Q8IWC1 876 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 MAIP1Q8WWC4 291 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 OVCA2Q8WZ82 227 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 MYRFLQ96LU7 910 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 SMOC2Q9H3U7 446 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 GRHL1Q9NZI5 618 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 NOVA2Q9UNW9 492 aaKnown RBP20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 hCG_1818297A0A087WSY0 165 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 E7EVH7 732 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 PTPN7P35236 360 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 CXCR3P49682 368 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 PLD1Q13393 1074 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 DENND2CQ68D51 928 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 CCDC137Q6PK04 289 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 DNAJB7Q7Z6W7 309 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 ZDHHC14Q8IZN3 488 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 OTUD6BQ8N6M0 293 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 PDZD8Q8NEN9 1154 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 RNF34Q969K3 372 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 ZNF512Q96ME7 567 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 CALN1Q9BXU9 219 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 DHX35Q9H5Z1 703 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 WDCPQ9H6R7 721 aa20.01■□□□□ 0.79
PDLIM2-204ENST00000397760 C5orf60A6NFR6 353 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 IRAK2O43187 625 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 FSBPO95073 299 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 ADRA1BP35368 520 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 EIF4EBP2Q13542 120 aaPredicted RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 TAZQ16635 292 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 SKIDA1Q1XH10 827 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 PPP2R2DQ66LE6 453 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 PDE12Q6L8Q7 609 aaKnown RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 MSANTD2Q6P1R3 559 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 PSTKQ8IV42 348 aaKnown RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 PSMG2Q969U7 264 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 TRMT2BQ96GJ1 504 aaKnown RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 MAGEB5Q9BZ81 275 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 STMN4Q9H169 189 aaPredicted RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 EPB41L4BQ9H329 900 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 LRRC19Q9H756 370 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 PCDH18Q9HCL0 1135 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 TMPRSS4Q9NRS4 437 aa20■□□□□ 0.79
PDLIM2-204ENST00000397760 OLA1Q9NTK5 396 aaKnown RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 COL4A4P53420 1690 aaPredicted RBP20■□□□□ 0.79
PDLIM2-204ENST00000397760 TJP3O95049 919 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 TBX18O95935 607 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 C8AP07357 584 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 L1CAMP32004 1257 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 BMP8BP34820 402 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 COILP38432 576 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 CLCN4P51793 760 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 MAGOHP61326 146 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 ADCY2Q08462 1091 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 KLF1Q13351 362 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 DPYSL3Q14195 570 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 SIX1Q15475 284 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 DPYSL2Q16555 572 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 C6orf118Q5T5N4 469 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 SYDE1Q6ZW31 735 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 ITIH5Q86UX2 942 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 NTAN1Q96AB6 310 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 SERPINB11Q96P15 392 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 TRIM31Q9BZY9 425 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 EFR3BQ9Y2G0 817 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 MSI1O43347 362 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 LRG1P02750 347 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 AIF1P55008 147 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 PLTPP55058 493 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 EFEMP1Q12805 493 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 MMRN1Q13201 1228 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 ARL13BQ3SXY8 428 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 PPP6R3Q5H9R7 873 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 C10orf120Q5SQS8 335 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 C6orf89Q6UWU4 347 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 PYROXD2Q8N2H3 581 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 MICALL1Q8N3F8 863 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 FBXO25Q8TCJ0 367 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 ARNTL2Q8WYA1 636 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 P3H4Q92791 437 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 KCTD15Q96SI1 283 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 TKTL2Q9H0I9 626 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 SLC28A3Q9HAS3 691 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 MTMR10Q9NXD2 777 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 TRPM5Q9NZQ8 1165 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 BCCIPQ9P287 314 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 SNX24Q9Y343 169 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 ASB3Q9Y575 518 aa19.99■□□□□ 0.79
PDLIM2-204ENST00000397760 PLXNA3P51805 1871 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 ZNF840PA6NDX5 716 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 TLR5O60602 858 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 SEC24CP53992 1094 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 EFHC2Q5JST6 749 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 SNX30Q5VWJ9 437 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 PACS2Q86VP3 889 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 RFX6Q8HWS3 928 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 ART4Q93070 314 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 MAK16Q9BXY0 300 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 RABEP2Q9H5N1 569 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 CCSER2Q9H7U1 834 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms