RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 WLSQ5T9L3 541 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 OTOAQ7RTW8 1153 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 CCNJLQ8IV13 435 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 PCDH20Q8N6Y1 951 aaKnown RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 APBA2Q99767 749 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 SEMA6AQ9H2E6 1030 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 COPS7BQ9H9Q2 264 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 NSMCE4AQ9NXX6 385 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 KIAA1257Q9ULG3 409 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 VWA5AO00534 786 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 APOA4P06727 396 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 IRF1P10914 325 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 PSMA4P25789 261 aaKnown RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 MSX2P35548 267 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 OR1G1P47890 313 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 C10orf120Q5SQS8 335 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 TDRD10Q5VZ19 366 aaKnown RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 GPR141Q7Z602 305 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 UNC45BQ8IWX7 931 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 AGBL3Q8NEM8 1001 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 RIN3Q8TB24 985 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 GANCQ8TET4 914 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 ZMAT2Q96NC0 199 aaKnown RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 SAR1AQ9NR31 198 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 RBM22Q9NW64 420 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 GPRC5DQ9NZD1 345 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 WRAP73Q9P2S5 460 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 SLC17A7Q9P2U7 560 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 BARX2Q9UMQ3 279 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-204ENST00000397545 PLA2G4CQ9UP65 541 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 NCANO14594 1321 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 LACTBL1A8MY62 500 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 APOA1P02647 267 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 PYGLP06737 847 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 CYP3A4P08684 503 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 ZNF286BP0CG31 522 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 TKTL1P51854 596 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 GTF2BQ00403 316 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 ADIGQ0VDE8 80 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 NRF1Q16656 503 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 TTC27Q6P3X3 843 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 DLK2Q6UY11 383 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 CPNE8Q86YQ8 564 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 MFN1Q8IWA4 741 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 URGCPQ8TCY9 931 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 MARK4Q96L34 752 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 GPR63Q9BZJ6 419 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 GGA2Q9UJY4 613 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 NUDT5Q9UKK9 219 aa11.03□□□□□ -0.64
CCDC40-204ENST00000397545 BTNL10A8MVZ5 291 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 WNT10BO00744 389 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 FGFR3P22607 806 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 AKT1P31749 480 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 TNFSF9P41273 254 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 FAM182AQ5T1J6 154 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 LINC00523Q86TU6 105 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 DEFB106AQ8N104 65 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 FITM2Q8N6M3 262 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 TRIM62Q9BVG3 475 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 A1CFQ9NQ94 594 aaKnown RBP11.02□□□□□ -0.64
CCDC40-204ENST00000397545 BLOC1S6Q9UL45 172 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 MYH10P35580 1976 aa11.02□□□□□ -0.64
CCDC40-204ENST00000397545 SMCHD1A6NHR9 2005 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 ANKRD31Q8N7Z5 1873 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 UBDO15205 165 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 HIST1H2AGP0C0S8 130 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 HIST1H2ADP20671 130 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 NFYCQ13952 458 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 IRGCQ6NXR0 463 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 TRABD2AQ86V40 505 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 ADGRF2Q8IZF7 708 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 HIST1H2AHQ96KK5 128 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 HIST1H2AJQ99878 128 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 H2AFJQ9BTM1 129 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 EIF2AQ9BY44 585 aaKnown RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 MUC3BQ9H195 1237 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 SETD4Q9NVD3 440 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 CLIC5Q9NZA1 410 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 SCN9AQ15858 1988 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 STX7O15400 261 aaKnown RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 DDX3YO15523 660 aaKnown RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 GAS2O43903 313 aaKnown RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 DEAF1O75398 565 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 MYO1DO94832 1006 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 PIGNO95427 931 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 SLC25A27O95847 323 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 FASTKD3Q14CZ7 662 aaKnown RBP11.02□□□□□ -0.65
CCDC40-204ENST00000397545 UGCGQ16739 394 aa11.02□□□□□ -0.65
CCDC40-204ENST00000397545 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms