RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SLC6A4P31645 630 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 TCF15Q12870 199 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 GAS6Q14393 721 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 FAM133BQ5BKY9 247 aaKnown RBP26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 RAP1GAP2Q684P5 730 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 DCUN1D2Q6PH85 259 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 MAMSTRQ6ZN01 415 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 TMC6Q7Z403 805 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 GAS2L3Q86XJ1 694 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 LGI2Q8N0V4 545 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 TERB1Q8NA31 727 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 HJURPQ8NCD3 748 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 EZH1Q92800 747 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 PIGVQ9NUD9 493 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 ADAMTS1Q9UHI8 967 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 FBXO4Q9UKT5 387 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 SLC8A2Q9UPR5 921 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 ARIH1Q9Y4X5 557 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 F5H5T6 163 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 CISD3P0C7P0 127 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 DESP17661 470 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 TFE3P19532 575 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 TACR2P21452 398 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 GPD1P21695 349 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 RRM1P23921 792 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 RDXP35241 583 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 TIE1P35590 1138 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 GSCP56915 257 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 MRPS21P82921 87 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 MESP2Q0VG99 397 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 EIF4EBP2Q13542 120 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 CDO1Q16878 200 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 MS4A13Q5J8X5 152 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 BRMS1LQ5PSV4 323 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 HGSNATQ68CP4 663 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 PHTF2Q8N3S3 785 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 JOSD2Q8TAC2 188 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 NT5C3BQ969T7 300 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 ACDQ96AP0 544 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 PGAP3Q96FM1 320 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 SIK2Q9H0K1 926 aa26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 XPO7Q9UIA9 1087 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-207ENST00000397411 CHURC1-FNTBB4DL54 471 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 RFC1P35251 1148 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 CXCR3P49682 368 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 SATB1Q01826 763 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 EMC10Q5UCC4 262 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 SFTPA1Q8IWL2 248 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 DRC7Q8IY82 874 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 CFAP52Q8N1V2 620 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 CCDC33Q8N5R6 958 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 USP33Q8TEY7 942 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 TRIM11Q96F44 468 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 TKTL2Q9H0I9 626 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 PARVAQ9NVD7 372 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 FBXO10Q9UK96 956 aa26.27■■□□□ 1.8
TSPAN4-207ENST00000397411 KIAA1549LQ6ZVL6 1849 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 C2CD4BA6NLJ0 364 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 AP5Z1O43299 807 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 PLEKP08567 350 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 SP9P0CG40 484 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 HOXD9P28356 352 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 MPP7Q5T2T1 576 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 SDE2Q6IQ49 451 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 TRNP1Q6NT89 227 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 PKN3Q6P5Z2 889 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 WDR59Q6PJI9 974 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 TSSK4Q6SA08 328 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 CARNMT1Q8N4J0 409 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 ZNF557Q8N988 423 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 UCMAQ8WVF2 138 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 CALCOCO1Q9P1Z2 691 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 SLC27A6Q9Y2P4 619 aa26.26■■□□□ 1.79
TSPAN4-207ENST00000397411 PAGE1O75459 146 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 KLF8O95600 359 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 ADCY5O95622 1261 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 SGSHP51688 502 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 ADKP55263 362 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 RPS24P62847 133 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 C15orf59Q2T9L4 293 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 CCDC14Q49A88 953 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 RABGAP1LQ5R372 815 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 OTUD1Q5VV17 481 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 ANKS1BQ7Z6G8 1248 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 DNAAF5Q86Y56 855 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 ZNF653Q96CK0 615 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 P2RY11Q96G91 374 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 MCEEQ96PE7 176 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 DEF6Q9H4E7 631 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 MYO1AQ9UBC5 1043 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 CNOT8Q9UFF9 292 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 CLEC4EQ9ULY5 219 aa26.25■■□□□ 1.79
TSPAN4-207ENST00000397411 AKR1B15C9JRZ8 316 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 H0Y626 953 aa26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 GFRA2O00451 464 aa26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 MYBL1P10243 752 aa26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 PTPN9P43378 593 aa26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 ATXN1P54253 815 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 NRLP54845 237 aa26.24■■□□□ 1.79
TSPAN4-207ENST00000397411 ARL13BQ3SXY8 428 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms