RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SIX6OS1Q8N1H7 587 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 LPPQ93052 612 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 EBNA1BP2Q99848 306 aaKnown RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 SPATS2LQ9NUQ6 558 aaKnown RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 SLC17A6Q9P2U8 582 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 USP3Q9Y6I4 520 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 C2orf71A6NGG8 1288 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 DCTN3O75935 186 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 TROVE2P10155 538 aaKnown RBP eCLIP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 PTDSS1P48651 473 aaKnown RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 SESN2P58004 480 aaPredicted RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 PARP6Q2NL67 630 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 OTUD1Q5VV17 481 aaPredicted RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 CLEC20AQ6ZU45 233 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 COLGALT1Q8NBJ5 622 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 KCNK16Q96T55 309 aa24.5■■□□□ 1.51
PABPN1-202ENST00000397276 HNRNPABQ99729 332 aaKnown RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 FRMD8Q9BZ67 464 aaPredicted RBP24.5■■□□□ 1.51
PABPN1-202ENST00000397276 WDR27A2RRH5 827 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 MLH1P40692 756 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 TKTL1P51854 596 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 RFWD3Q6PCD5 774 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 MCUQ8NE86 351 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 RNF139Q8WU17 664 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 SYT15Q9BQS2 421 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 DDX43Q9NXZ2 648 aaKnown RBP24.49■■□□□ 1.51
PABPN1-202ENST00000397276 TOP3BO95985 862 aaKnown RBP24.49■■□□□ 1.51
PABPN1-202ENST00000397276 MAGEA6P43360 314 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 C11orf91Q3C1V1 193 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 RNF169Q8NCN4 708 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 PIDD1Q9HB75 910 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 KRT82Q9NSB4 513 aa24.49■■□□□ 1.51
PABPN1-202ENST00000397276 MYADML2A6NDP7 307 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 NRP1O14786 923 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 PRKCHP24723 683 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 GSDMBQ8TAX9 411 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 PGLYRP2Q96PD5 576 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 GAD1Q99259 594 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 PIGVQ9NUD9 493 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 CAPN9O14815 690 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 LUC7L3O95232 432 aaKnown RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 C6orf222P0C671 652 aaPredicted RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 WARSP23381 471 aaKnown RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 SERPINB4P48594 390 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 DEUP1Q05D60 604 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 TAF1CQ15572 869 aaPredicted RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 FSCN1Q16658 493 aaKnown RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 ARCQ7LC44 396 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 SLC7A14Q8TBB6 771 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 DEPDC1BQ8WUY9 529 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 P2RY11Q96G91 374 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 PCMTD2Q9NV79 361 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 IL1RAPL1Q9NZN1 696 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 KANSL3Q9P2N6 904 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 ZFP69BQ9UJL9 534 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 MYO18AQ92614 2054 aaKnown RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 ZNF487B1APH4 448 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 TRDMT1O14717 391 aaKnown RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 LIN7AO14910 233 aaPredicted RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 DGKIO75912 1065 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 TOP6BLQ8N6T0 577 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 SENP8Q96LD8 212 aa24.48■■□□□ 1.51
PABPN1-202ENST00000397276 TSPYL2Q9H2G4 693 aaPredicted RBP24.48■■□□□ 1.51
PABPN1-202ENST00000397276 CCDC195A0A1B0GUA6 201 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 FAM72CH0Y354 149 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 RFPL1O75677 317 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 DHRS4L1P0CG22 281 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 NOS2P35228 1153 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 SCNN1AP37088 669 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 MAGEA3P43357 314 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 IRX4P78413 519 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 BIRC2Q13490 618 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 OLIG2Q13516 323 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 FAM72AQ5TYM5 149 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 FAM72DQ6L9T8 149 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 LIMS2Q7Z4I7 341 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 FAM72BQ86X60 149 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 OLFM3Q96PB7 478 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 ULBP1Q9BZM6 244 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 CRTAC1Q9NQ79 661 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 RALGAPA2Q2PPJ7 1873 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 A0A0A0MRY4 1105 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 MYBPHLA2RUH7 354 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 KCNK1O00180 336 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 RNF103O00237 685 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 TPSB2P20231 275 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 CLCNKBP51801 687 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 SEMA5AQ13591 1074 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 TPSAB1Q15661 275 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 NBPF20Q3BBV1 942 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 LGSNQ5TDP6 509 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 SPATA13Q96N96 652 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 TRIM55Q9BYV6 548 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 DNAI2Q9GZS0 605 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 PRDM12Q9H4Q4 367 aa24.47■■□□□ 1.51
PABPN1-202ENST00000397276 HUNKP57058 714 aa24.46■■□□□ 1.51
PABPN1-202ENST00000397276 PPP1R10Q96QC0 940 aaKnown RBP24.46■■□□□ 1.51
PABPN1-202ENST00000397276 ZNF395Q9H8N7 513 aaPredicted RBP24.46■■□□□ 1.51
PABPN1-202ENST00000397276 MIOSQ9NXC5 875 aa24.46■■□□□ 1.51
PABPN1-202ENST00000397276 HMX2A2RU54 273 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms