RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 RPL15P61313 204 aaKnown RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 GRAMD1BQ3KR37 738 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 TRIM60Q495X7 471 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 MEX3CQ5U5Q3 659 aaKnown RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 KIAA1614Q5VZ46 1190 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 RFX6Q8HWS3 928 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 SLC44A2Q8IWA5 706 aaPredicted RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 LAS2Q8IYD9 372 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 MYCT1Q8N699 235 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 SCAMP5Q8TAC9 235 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 HMGB4Q8WW32 186 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 LTV1Q96GA3 475 aaPredicted RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 FCRL5Q96RD9 977 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 SENP7Q9BQF6 1050 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 PABPC3Q9H361 631 aaKnown RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 PRDM8Q9NQV8 689 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 HERC5Q9UII4 1024 aaKnown RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 DAPP1Q9UN19 280 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 LZTS1Q9Y250 596 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 ZBTB1Q9Y2K1 713 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 NBNO60934 754 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 TCEA3O75764 348 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 PLAUP00749 431 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 KELP23276 732 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 ZNF84P51523 738 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 AP2B1P63010 937 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 CFHR1Q03591 330 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 DMWDQ09019 674 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 DAZAP2Q15038 168 aaPredicted RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 TIGD6Q17RP2 521 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 MTX3Q5HYI7 312 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 ATPAF1Q5TC12 328 aaPredicted RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 WDR93Q6P2C0 686 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 IGFBPL1Q8WX77 278 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 CELF1Q92879 486 aaKnown RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 ZNF845Q96IR2 970 aaPredicted RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 GPR78Q96P69 363 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 GATA5Q9BWX5 397 aaPredicted RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 SORBS1Q9BX66 1292 aaKnown RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 PRSS22Q9GZN4 317 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 AGO4Q9HCK5 861 aaKnown RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 SEPSECSQ9HD40 501 aaKnown RBP4.71□□□□□ -1.66
CMC1-202ENST00000396610 NRIP3Q9NQ35 241 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 B3GNT3Q9Y2A9 372 aa4.71□□□□□ -1.66
CMC1-202ENST00000396610 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 DNAJC9-AS1A6NH13 148 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 E5RJQ4 531 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 ADAM10O14672 748 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 TP73O15350 636 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 ALDOAP04075 364 aaKnown RBP4.7□□□□□ -1.66
CMC1-202ENST00000396610 HOXA7P31268 230 aaPredicted RBP4.7□□□□□ -1.66
CMC1-202ENST00000396610 GRK5P34947 590 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 SOX2P48431 317 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 SLC37A1P57057 533 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 FOXL2P58012 376 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 FOXO1Q12778 655 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 MTA1Q13330 715 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 Q4G0T1 1027 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 TTC22Q5TAA0 569 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 TANGO2Q6ICL3 276 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 JMJD6Q6NYC1 403 aaPredicted RBP4.7□□□□□ -1.66
CMC1-202ENST00000396610 NFRKBQ6P4R8 1299 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 RAB11FIP2Q7L804 512 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 PIGKQ92643 395 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 RSC1A1Q92681 617 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 TRIM2Q9C040 744 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 VPS16Q9H269 839 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 ELAC1Q9H777 363 aaKnown RBP4.7□□□□□ -1.66
CMC1-202ENST00000396610 PRDM16Q9HAZ2 1276 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 ZNF804BA4D1E1 1349 aa4.7□□□□□ -1.66
CMC1-202ENST00000396610 CYP2D7A0A087X1C5 515 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 WDR91A4D1P6 747 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 C2CD4BA6NLJ0 364 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 IPO5O00410 1097 aaKnown RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 CNTN5O94779 1100 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 HEXIM1O94992 359 aaKnown RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 LARGE1O95461 756 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 RPS6KB1P23443 525 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 PRKAA2P54646 552 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 SSBP2P81877 361 aaPredicted RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 GHRHRQ02643 423 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 TLE3Q04726 772 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 KLF9Q13886 244 aaPredicted RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 PDCD2Q16342 344 aaPredicted RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 GALNTL6Q49A17 601 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 MORN5Q5VZ52 161 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 PAPD7Q5XG87 772 aaKnown RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 ZKSCAN2Q63HK3 967 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 ANO7Q6IWH7 933 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 DHRS13Q6UX07 377 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 SLC39A5Q6ZMH5 540 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 RBM44Q6ZP01 1051 aaKnown RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 RRAGAQ7L523 313 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 RHPN2Q8IUC4 686 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 ADGRF3Q8IZF5 1079 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 CLEC4CQ8WTT0 213 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 C3orf49Q96BT1 292 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 P2RY11Q96G91 374 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms