RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 RFWD2Q8NHY2 731 aa11.9□□□□□ -0.5
PDXDC1-202ENST00000396410 PRKAG3Q9UGI9 489 aa11.9□□□□□ -0.5
PDXDC1-202ENST00000396410 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
PDXDC1-202ENST00000396410 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 H0Y3Z8 333 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 MGRN1O60291 552 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 LTFP02788 710 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 CCND1P24385 295 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 PARP6Q2NL67 630 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 SCN4BQ8IWT1 228 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 APBA2Q99767 749 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 PTPN18Q99952 460 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 WWP1Q9H0M0 922 aa11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 RCOR3Q9P2K3 495 aaPredicted RBP11.9□□□□□ -0.51
PDXDC1-202ENST00000396410 UGT1A9O60656 530 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 HNRNPCL1O60812 293 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CCDC22O60826 627 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CIB2O75838 187 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 PGK1P00558 417 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 F9P00740 461 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 PGAM1P18669 254 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CNTFP26441 200 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 COG7P83436 770 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CDK16Q00536 496 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SLC10A2Q12908 348 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SYPL2Q5VXT5 272 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 BTBD8Q5XKL5 378 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CGB2Q6NT52 195 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 TRMT10BQ6PF06 316 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 FAM35AQ86V20 835 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CAND1Q86VP6 1230 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 FAM228AQ86W67 206 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SMARCD1Q96GM5 515 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 NAT9Q9BTE0 207 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 MECRQ9BV79 373 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 UGT1A7Q9HAW7 530 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 UGT1A10Q9HAW8 530 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 UGT1A8Q9HAW9 530 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CCDC78A2IDD5 438 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 MBLAC1A4D2B0 266 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 C2CD2LO14523 706 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 USP12O75317 370 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SERPINB3P29508 390 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CLCNKBP51801 687 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SESN3P58005 492 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 RGS9BPQ6ZS82 235 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 PRDM16Q9HAZ2 1276 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 L3MBTL1Q9Y468 752 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 PTPRFP10586 1907 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 ERCC2P18074 760 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 YY1P25490 414 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 GRIK1P39086 918 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SKIV2L2P42285 1042 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CLNS1AP54105 237 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 NAA25Q14CX7 972 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CYP4V2Q6ZWL3 525 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 NSL1Q96IY1 281 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 APOL2Q9BQE5 337 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 KPNA6O60684 536 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CSH1P0DML2 217 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 CSH2P0DML3 217 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 ZNF398Q8TD17 642 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 KCNK16Q96T55 309 aa11.89□□□□□ -0.51
PDXDC1-202ENST00000396410 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 ITKQ08881 620 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 ALKAL1Q6UXT8 129 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 SPATA2LQ8IUW3 424 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 C10orf82Q8WW14 230 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 SCYL1Q96KG9 808 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 FAM193BQ96PV7 902 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 TKTL2Q9H0I9 626 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 MYBPHLA2RUH7 354 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 MTSS1O43312 755 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 BEST1O76090 585 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 BDNFP23560 247 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 ADRA1BP35368 520 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 SEMA5AQ13591 1074 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 PSTKQ8IV42 348 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 ARRDC4Q8NCT1 418 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.515e-7■■■■■ 29.9
PDXDC1-202ENST00000396410 PCED1BQ96HM7 432 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 CELF6Q96J87 481 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 WDR83Q9BRX9 315 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-202ENST00000396410 LRRC40Q9H9A6 602 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms