RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FNIP1Q8TF40 1166 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 DDI1Q8WTU0 396 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 CD101Q93033 1021 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 BHMTQ93088 406 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 TMA16Q96EY4 203 aaKnown RBP19.9■□□□□ 0.78
HOXA9-202ENST00000396345 NELL2Q99435 816 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 P2RY13Q9BPV8 354 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 FOXQ1Q9C009 403 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 TRIM7Q9C029 511 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 RAB6CQ9H0N0 254 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 LTB4R2Q9NPC1 389 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 PLK2Q9NYY3 685 aa19.9■□□□□ 0.78
HOXA9-202ENST00000396345 NDRG2Q9UN36 371 aaKnown RBP19.9■□□□□ 0.78
HOXA9-202ENST00000396345 GFRA2O00451 464 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 GPR37L1O60883 481 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 PAGE1O75459 146 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 TACR2P21452 398 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 OPRD1P41143 372 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 GALK1P51570 392 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 HDAC4P56524 1084 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 SPA17Q15506 151 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 MS4A13Q5J8X5 152 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 PIK3R6Q5UE93 754 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 FYB2Q5VWT5 728 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 RAP1GAP2Q684P5 730 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 NAIF1Q69YI7 327 aaPredicted RBP19.89■□□□□ 0.77
HOXA9-202ENST00000396345 BMP8AQ7Z5Y6 402 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 XPO6Q96QU8 1125 aaKnown RBP19.89■□□□□ 0.77
HOXA9-202ENST00000396345 IRX2Q9BZI1 471 aaPredicted RBP19.89■□□□□ 0.77
HOXA9-202ENST00000396345 C11orf16Q9NQ32 467 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 CTTNBP2NLQ9P2B4 639 aa19.89■□□□□ 0.77
HOXA9-202ENST00000396345 EPN1Q9Y6I3 576 aaPredicted RBP19.89■□□□□ 0.77
HOXA9-202ENST00000396345 FAM170BA6NMN3 283 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 EIF3CLB5ME19 914 aaKnown RBP19.88■□□□□ 0.77
HOXA9-202ENST00000396345 LCA5LO95447 670 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 PENKP01210 267 aaPredicted RBP19.88■□□□□ 0.77
HOXA9-202ENST00000396345 TARSP26639 723 aaKnown RBP19.88■□□□□ 0.77
HOXA9-202ENST00000396345 EIF2DP41214 584 aaKnown RBP19.88■□□□□ 0.77
HOXA9-202ENST00000396345 MAGEA1P43355 309 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 SLC6A11P48066 632 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 ARL13BQ3SXY8 428 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 C12orf40Q86WS4 652 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 TMEM139Q8IV31 216 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 LGI2Q8N0V4 545 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 P2RY11Q96G91 374 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 EIF3CQ99613 913 aaKnown RBP19.88■□□□□ 0.77
HOXA9-202ENST00000396345 SIK2Q9H0K1 926 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 ANLNQ9NQW6 1124 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 RAPGEFL1Q9UHV5 662 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 INTUQ9ULD6 942 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 MTF2Q9Y483 593 aaPredicted RBP19.88■□□□□ 0.77
HOXA9-202ENST00000396345 HS3ST4Q9Y661 456 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 MIA3Q5JRA6 1907 aa19.88■□□□□ 0.77
HOXA9-202ENST00000396345 TYW5A2RUC4 315 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 F5H5T6 163 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 CACNG3O60359 315 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 TBL1XO60907 577 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 NDUFA10O95299 355 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 ADRA1BP35368 520 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 SGSHP51688 502 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 ZNF252P-AS1Q0IIN9 211 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 GRSF1Q12849 480 aaKnown RBP eCLIP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 GSE1Q14687 1217 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 TMEM196Q5HYL7 178 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 TMEM31Q5JXX7 168 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 CWF19L1Q69YN2 538 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 SCYL2Q6P3W7 929 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 RAD9BQ6WBX8 426 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 ETFBKMTQ8IXQ9 262 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 HJURPQ8NCD3 748 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 PJA1Q8NG27 643 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 ZNF564Q8TBZ8 553 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 ANP32BQ92688 251 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 HAPLN3Q96S86 360 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 PNKPQ96T60 521 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 PRMT1Q99873 361 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 OSBPL6Q9BZF3 934 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 FBRSL1Q9HCM7 1045 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 LUC7LQ9NQ29 371 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 TMPRSS4Q9NRS4 437 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 DNAJC17Q9NVM6 304 aaKnown RBP19.87■□□□□ 0.77
HOXA9-202ENST00000396345 DEC1Q9P2X7 70 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 UVRAGQ9P2Y5 699 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 ANAPC7Q9UJX3 599 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 SIT1Q9Y3P8 196 aa19.87■□□□□ 0.77
HOXA9-202ENST00000396345 PRR33A8MZF0 331 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 I6L893 689 aaPredicted RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 NCAM2O15394 837 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 TULP3O75386 442 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 RNF8O76064 485 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 IPO7O95373 1038 aaKnown RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 AUHQ13825 339 aaKnown RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 ACBD5Q5T8D3 534 aaPredicted RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 ASTLQ6HA08 431 aaPredicted RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 SUGP1Q8IWZ8 645 aaKnown RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 ZNF687Q8N1G0 1237 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 FBXL6Q8N531 539 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 CCDC185Q8N715 623 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 MYEOVQ96EZ4 313 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms