RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CTGFP29279 349 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 GRIA1P42261 906 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
NUP50-202ENST00000396096 PARP6Q2NL67 630 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 CXCL17Q6UXB2 119 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 DSTYKQ6XUX3 929 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 TBC1D1Q86TI0 1168 aaPredicted RBP17.31■□□□□ 0.36
NUP50-202ENST00000396096 CCNJLQ8IV13 435 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 RNF169Q8NCN4 708 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 C3orf58Q8NDZ4 430 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 STAMBPL1Q96FJ0 436 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 OXNAD1Q96HP4 312 aaPredicted RBP17.31■□□□□ 0.36
NUP50-202ENST00000396096 MYLK2Q9H1R3 596 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 C12orf65Q9H3J6 166 aaKnown RBP17.31■□□□□ 0.36
NUP50-202ENST00000396096 CSNK1G1Q9HCP0 422 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 TXLNGQ9NUQ3 528 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 IGSF9Q9P2J2 1179 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 CACNG4Q9UBN1 327 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 MAD1L1Q9Y6D9 718 aa17.31■□□□□ 0.36
NUP50-202ENST00000396096 COPEO14579 308 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 ZNF623O75123 536 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 TGDSO95455 350 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 SLC10A3P09131 477 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 TROVE2P10155 538 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUP50-202ENST00000396096 CNTFP26441 200 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 PCSK1P29120 753 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 ZNF135P52742 658 aaPredicted RBP17.3■□□□□ 0.36
NUP50-202ENST00000396096 WASHC5Q12768 1159 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 NME3Q13232 169 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 UPP1Q16831 310 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 TRMT10BQ6PF06 316 aaKnown RBP17.3■□□□□ 0.36
NUP50-202ENST00000396096 TIFABQ6ZNK6 161 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 PDZD4Q76G19 769 aaPredicted RBP17.3■□□□□ 0.36
NUP50-202ENST00000396096 BHLHA9Q7RTU4 235 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 SLC7A14Q8TBB6 771 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 LPPQ93052 612 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 KLHL29Q96CT2 875 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 SMARCD1Q96GM5 515 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 FAM111AQ96PZ2 611 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 LRRC37BQ96QE4 947 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 SRPK1Q96SB4 655 aaKnown RBP17.3■□□□□ 0.36
NUP50-202ENST00000396096 PRDM12Q9H4Q4 367 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 FBXW11Q9UKB1 542 aa17.3■□□□□ 0.36
NUP50-202ENST00000396096 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 SDR42E2A6NKP2 422 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 CAPN9O14815 690 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 CHUKO15111 745 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 CREB3O43889 395 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 LTFP02788 710 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 RAB27AP51159 221 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 SCNN1GP51170 649 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 KCNJ2P63252 427 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 AP1B1Q10567 949 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 ICE2Q659A1 982 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 MARK2Q7KZI7 788 aaKnown RBP17.29■□□□□ 0.36
NUP50-202ENST00000396096 GPRIN1Q7Z2K8 1008 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 SCML4Q8N228 414 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 IRGQQ8WZA9 623 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 PTPRN2Q92932 1015 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 TMEM30AQ9NV96 361 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 PLLPQ9Y342 182 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 SYNJ2BP-COX16A0A087WUM0 186 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 F9P00740 461 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 CTSHP09668 335 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 PAX3P23760 479 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 SERPINB4P48594 390 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 CACNA2D1P54289 1103 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 CRHR2Q13324 411 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 NAB1Q13506 487 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
NUP50-202ENST00000396096 MFSD14CQ5VZR4 134 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 SAPCD2Q86UD0 394 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 ERP27Q96DN0 273 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 THOC1Q96FV9 657 aaKnown RBP17.29■□□□□ 0.36
NUP50-202ENST00000396096 KCNK16Q96T55 309 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 RTP3Q9BQQ7 232 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 NAT9Q9BTE0 207 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 TSSK1BQ9BXA7 367 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 BRD8Q9H0E9 1235 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
NUP50-202ENST00000396096 SPC25Q9HBM1 224 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 COX16Q9P0S2 106 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 NR2E3Q9Y5X4 410 aa17.29■□□□□ 0.36
NUP50-202ENST00000396096 HMX2A2RU54 273 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 NCAM2O15394 837 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 UGT1A9O60656 530 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 CYP11A1P05108 521 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 ERCC2P18074 760 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 NIPAL4Q0D2K0 466 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 DSC3Q14574 896 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 FAM171BQ6P995 826 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 TRIM42Q8IWZ5 723 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 ZNF567Q8N184 647 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 PDCD7Q8N8D1 485 aaKnown RBP17.28■□□□□ 0.36
NUP50-202ENST00000396096 IQCGQ9H095 443 aaKnown RBP17.28■□□□□ 0.36
NUP50-202ENST00000396096 UGT1A7Q9HAW7 530 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 UGT1A10Q9HAW8 530 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms