RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PRKD1Q15139 912 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 RNF34Q969K3 372 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 ZNF317Q96PQ6 595 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 TKTL2Q9H0I9 626 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.4
ITGB1-202ENST00000396033 ERCC2P18074 760 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 MPP2Q14168 576 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 RASA2Q15283 850 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 ANKRD20A2Q5SQ80 823 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 ANKRD20A1Q5TYW2 823 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 ANKRD20A3Q5VUR7 823 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 CAND1Q86VP6 1230 aaKnown RBP12.52□□□□□ -0.4
ITGB1-202ENST00000396033 SCML4Q8N228 414 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 GDAP1Q8TB36 358 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 DQX1Q8TE96 717 aaKnown RBP12.52□□□□□ -0.4
ITGB1-202ENST00000396033 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.4
ITGB1-202ENST00000396033 PTPRDP23468 1912 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 NLRC5Q86WI3 1866 aa12.52□□□□□ -0.4
ITGB1-202ENST00000396033 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 RNF103O00237 685 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SPAG6O75602 509 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 VIMP08670 466 aaKnown RBP12.52□□□□□ -0.41
ITGB1-202ENST00000396033 TPSB2P20231 275 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 MSH2P43246 934 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 VEGFBP49765 207 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 TPSAB1Q15661 275 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 MICALCLQ6ZW33 695 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SCN4BQ8IWT1 228 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 ABI1Q8IZP0 508 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 AGGF1Q8N302 714 aaeCLIP12.52□□□□□ -0.41
ITGB1-202ENST00000396033 MCUQ8NE86 351 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 CYTH2Q99418 400 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.52□□□□□ -0.41
ITGB1-202ENST00000396033 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 TMEM161AQ9NX61 479 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 TCRBV9S1A1TA0A576 114 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SPAG7O75391 227 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 CXCR3P49682 368 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SEMA5AQ13591 1074 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 LRRC34Q8IZ02 419 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 C4orf33Q8N1A6 199 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 EPAS1Q99814 870 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 CEP41Q9BYV8 373 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 SNX10Q9Y5X0 201 aa12.52□□□□□ -0.41
ITGB1-202ENST00000396033 FAM47DPA6NHR8 397 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 TADA2AO75478 443 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 STX2P32856 288 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 FDFT1P37268 417 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 GLUD2P49448 558 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 BFSP2Q13515 415 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
ITGB1-202ENST00000396033 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 ZC3H7BQ9UGR2 993 aaKnown RBP12.51□□□□□ -0.41
ITGB1-202ENST00000396033 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 NBNO60934 754 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 TP53INP2Q8IXH6 220 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 DCP1BQ8IZD4 617 aaKnown RBP12.51□□□□□ -0.41
ITGB1-202ENST00000396033 COLGALT1Q8NBJ5 622 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 DHRS4Q9BTZ2 278 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 OPHN1O60890 802 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
ITGB1-202ENST00000396033 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 ZNF534Q76KX8 674 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 DBF4BQ8NFT6 615 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 SEC16BQ96JE7 1060 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 NSRP1Q9H0G5 558 aaKnown RBP12.51□□□□□ -0.41
ITGB1-202ENST00000396033 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 OR12D3Q9UGF7 316 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
ITGB1-202ENST00000396033 OAZ2O95190 189 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 HCAR3P49019 387 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 PRMT2P55345 433 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 DCAKDQ8WVC6 231 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 XAB2Q9HCS7 855 aaKnown RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 PCDHB7Q9Y5E2 793 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 A0A1W2PPM1 405 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 CBLBQ13191 982 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 CEP57Q86XR8 500 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 LRRC39Q96DD0 335 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 ABCC13Q9NSE7 274 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 SMG5Q9UPR3 1016 aaKnown RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 TRIM17Q9Y577 477 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 MAD1L1Q9Y6D9 718 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms