RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TWNKQ96RR1 684 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CPXM1Q96SM3 734 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SMYD3Q9H7B4 428 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 FAM105AQ9NUU6 356 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SETD4Q9NVD3 440 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CPA4Q9UI42 421 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ANAPC7Q9UJX3 599 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 AKT3Q9Y243 479 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SNX24Q9Y343 169 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 DOCK4Q8N1I0 1966 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TLR3O15455 904 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 TREHO43280 583 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 HNRNPCL1O60812 293 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 GCATO75600 419 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SPAG6O75602 509 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CFHP08603 1231 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PIM1P11309 404 aaPredicted RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 MLNP12872 115 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 ETS2P15036 469 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PFKLP17858 780 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 FGFR4P22455 802 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 KDELR1P24390 212 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 MARK3P27448 753 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PTPN4P29074 926 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CSRP3P50461 194 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 NDST1P52848 882 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TAS2R40P59535 323 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CDK18Q07002 472 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 NR1H3Q13133 447 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PRKG1Q13976 671 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SETDB1Q15047 1291 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CCL14Q16627 93 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 EFHC1Q5JVL4 640 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 MANEALQ5VSG8 457 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SPOPLQ6IQ16 392 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TRNP1Q6NT89 227 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 DCLRE1AQ6PJP8 1040 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 LRRC74BQ6ZQY2 392 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TTC30AQ86WT1 665 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 MGARPQ8TDB4 240 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PPP1R14BQ96C90 147 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SPATA17Q96L03 361 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 NLRP4Q96MN2 994 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TSGA13Q96PP4 275 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 GBP5Q96PP8 586 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PPP1R2P1Q96PQ5 205 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 EIF2AQ9BY44 585 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 OSBPL8Q9BZF1 889 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CDHR5Q9HBB8 845 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SPC25Q9HBM1 224 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 MTRF1LQ9UGC7 380 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 NEU3Q9UQ49 428 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 COMMD10Q9Y6G5 202 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TNPO2O14787 897 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 ALOX15BO15296 676 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CHADO15335 359 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 DCTN3O75935 186 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 C1QAP02745 245 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 VTNP04004 478 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 LYNP07948 512 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 FAM200BP0CF97 657 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 FGFR1P11362 822 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TPSB2P20231 275 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 GPD1P21695 349 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 FOXN2P32314 431 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 CETN2P41208 172 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 GLUD2P49448 558 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SP3Q02447 781 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SLC34A1Q06495 639 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 MPP3Q13368 585 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 NAB1Q13506 487 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 LPIN1Q14693 890 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 TPSAB1Q15661 275 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 HADHQ16836 314 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 CTC1Q2NKJ3 1217 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 WDR72Q3MJ13 1102 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SLC25A52Q3SY17 297 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 LIN52Q52LA3 116 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 STXBP5Q5T5C0 1151 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 RNASEH2BQ5TBB1 312 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 LMBRD2Q68DH5 695 aaPredicted RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 DNAJC24Q6P3W2 148 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 LRRC49Q8IUZ0 686 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 UHMK1Q8TAS1 419 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 ISL2Q96A47 359 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 LRRC37BQ96QE4 947 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 MIPEPQ99797 713 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 RTP3Q9BQQ7 232 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 SH2D3AQ9BRG2 576 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 PITPNM3Q9BZ71 974 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS41-203ENST00000395969 TRPV6Q9H1D0 765 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 OSBPL2Q9H1P3 480 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 ARHGEF38Q9NXL2 777 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 IL1RAPL1Q9NZN1 696 aa5.54□□□□□ -1.52
VPS41-203ENST00000395969 STX18Q9P2W9 335 aaKnown RBP5.54□□□□□ -1.52
VPS41-203ENST00000395969 TMEM221A6NGB7 291 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DNALI1O14645 258 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms