RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CCDC114Q96M63 670 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 RNF38Q9H0F5 515 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 ATXN3LQ9H3M9 355 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 HCFC1R1Q9NWW0 138 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 STIM2Q9P246 746 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 XPO7Q9UIA9 1087 aaKnown RBP21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 DNPEPQ9ULA0 475 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 RFXAPO00287 272 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 XYLBO75191 536 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 LRIG2O94898 1065 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 HEXIM1O94992 359 aaKnown RBP21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 SRGAP2BP0DMP2 458 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 NRIP1P48552 1158 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 CYP4F8P98187 520 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 BYSLQ13895 437 aaKnown RBP21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 DUSP6Q16828 381 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 TXNDC8Q6A555 127 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 DRICH1Q6PGQ1 229 aaPredicted RBP21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 UNC45BQ8IWX7 931 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 GRK7Q8WTQ7 553 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 ZDHHC7Q9NXF8 308 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 DMGDHQ9UI17 866 aaKnown RBP21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 HEY1Q9Y5J3 304 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 HS3ST4Q9Y661 456 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 A0A1W2PRU2 124 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 MBL2P11226 248 aaPredicted RBP21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 MTA1Q13330 715 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 DPYSQ14117 519 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 ZNF697Q5TEC3 545 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 NCBP2-AS2Q69YL0 99 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 ATL2Q8NHH9 583 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 PLD4Q96BZ4 506 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 C1orf74Q96LT6 269 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 PNKPQ96T60 521 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 HINFPQ9BQA5 517 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 PARD6BQ9BYG5 372 aa21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 FEZ2Q9UHY8 353 aaPredicted RBP21.1■□□□□ 0.97
VCPKMT-202ENST00000395860 DOCK6Q96HP0 2047 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 FAM187AA6NFU0 413 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 MCF2LO15068 1137 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 ECEL1O95672 775 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 FGF19O95750 216 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 EPHB2P29323 1055 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 PTGIRP43119 386 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 RGS19P49795 217 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 KCNQ1P51787 676 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 VCPP55072 806 aaKnown RBP21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 NOMO1Q15155 1222 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 PIK3R6Q5UE93 754 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 PDZD4Q76G19 769 aaPredicted RBP21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 SLC35B2Q8TB61 432 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 MRPL38Q96DV4 380 aaKnown RBP21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 ETNK2Q9NVF9 386 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 DNMT3BQ9UBC3 853 aaKnown RBP21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 ZNF148Q9UQR1 794 aa21.09■□□□□ 0.97
VCPKMT-202ENST00000395860 ERCC2P18074 760 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 HDCP19113 662 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 HTR7P34969 479 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 HARS2P49590 506 aaKnown RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 MLLT6P55198 1093 aaPredicted RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 EIF3EP60228 445 aaKnown RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 NRG1Q02297 640 aaPredicted RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 LMNB2Q03252 620 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 RWDD4Q6NW29 188 aaKnown RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 JAMLQ86YT9 394 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 ARL14EPQ8N8R7 260 aaPredicted RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 MAB21L3Q8N8X9 362 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 SLCO2A1Q92959 643 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 NKD2Q969F2 451 aaPredicted RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 PPP2R3CQ969Q6 453 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 CYP2S1Q96SQ9 504 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 KLF16Q9BXK1 252 aaPredicted RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 PRKD2Q9BZL6 878 aa21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 DRG1Q9Y295 367 aaKnown RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 TNRC18O15417 2968 aaPredicted RBP21.08■□□□□ 0.97
VCPKMT-202ENST00000395860 HELZP42694 1942 aaKnown RBP21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 CCDC195A0A1B0GUA6 201 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 DYNC1I1O14576 645 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 GJA1P17302 382 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 EPHA5P54756 1037 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 RBM10P98175 930 aaKnown RBP21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 GUCY2DQ02846 1103 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 PPP1R7Q15435 360 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 MS4A13Q5J8X5 152 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 ACBD5Q5T8D3 534 aaPredicted RBP21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 TMCO3Q6UWJ1 677 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 TBC1D31Q96DN5 1066 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 SLC22A12Q96S37 553 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 CDCA3Q99618 268 aaPredicted RBP21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 TRIM51Q9BSJ1 452 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 RAB17Q9H0T7 212 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 GKN1Q9NS71 199 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 UTP11Q9Y3A2 253 aaKnown RBP21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 MFHAS1Q9Y4C4 1052 aa21.08■□□□□ 0.96
VCPKMT-202ENST00000395860 E9PAM4 449 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 DCLK1O15075 740 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 OLFM2O95897 454 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 GAS8O95995 478 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 TUBBP07437 444 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 RHOP08100 348 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms