RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 LRRTM3Q86VH5 581 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 AHI1Q8N157 1196 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 NSUN6Q8TEA1 469 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 LEO1Q8WVC0 666 aaPredicted RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 LMBR1Q8WVP7 490 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 FOXRED1Q96CU9 486 aaPredicted RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 MED8Q96G25 268 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 MSANTD3Q96H12 275 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 CLUHP3Q96NS8 147 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 USP44Q9H0E7 712 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PLEKHA4Q9H4M7 779 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PCIF1Q9H4Z3 704 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PTPRHQ9HD43 1115 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PIH1D3Q9NQM4 214 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 RGS18Q9NS28 235 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 ATP8A2Q9NTI2 1148 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 ZDHHC7Q9NXF8 308 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PLA2G3Q9NZ20 509 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 EVLQ9UI08 416 aaPredicted RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 PA2G4Q9UQ80 394 aaKnown RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 DAAM1Q9Y4D1 1078 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 SPEF1Q9Y4P9 236 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 LRRK2Q5S007 2527 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 LRBAP50851 2863 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 LOXHD1Q8IVV2 1947 aa6.05□□□□□ -1.44
AP3S1-202ENST00000395548 FNDC1Q4ZHG4 1894 aaPredicted RBP6.05□□□□□ -1.44
AP3S1-202ENST00000395548 CACNA1EQ15878 2313 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 CCDC171Q6TFL3 1326 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 C2orf16Q68DN1 1984 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 KIAA1217Q5T5P2 1943 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ITPR2Q14571 2701 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 DOCK8Q8NF50 2099 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 CFAP69A5D8W1 941 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 H2AFYO75367 372 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ECI2O75521 394 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 RFPL1O75677 317 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 TTLL1O95922 423 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 GLUD1P00367 558 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 C1RP00736 705 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 AFPP02771 609 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 LGALS2P05162 132 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 FTH1P19P0C7X4 201 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ZSCAN20P17040 1043 aaPredicted RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 RPL17P18621 184 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ACVRL1P37023 503 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 SLC1A4P43007 532 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 PPM1FP49593 454 aaPredicted RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 METAP2P50579 478 aaKnown RBP eCLIP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 IRX4P78413 519 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 HHEXQ03014 270 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 HGFACQ04756 655 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 USP39Q53GS9 565 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 DGKKQ5KSL6 1271 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 C12orf60Q5U649 245 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 CCDC70Q6NSX1 233 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 KLHDC10Q6PID8 442 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 LRRC55Q6ZSA7 311 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 Q8N1X5 172 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 GALNT15Q8N3T1 639 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 PDILTQ8N807 584 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ENAHQ8N8S7 591 aaPredicted RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 TEX19Q8NA77 164 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 OR14K1Q8NGZ2 314 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 DNAJB3Q8WWF6 145 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 RSPH1Q8WYR4 309 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 GFM2Q969S9 779 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ZNF707Q96C28 371 aaPredicted RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 NAP1L5Q96NT1 182 aaPredicted RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 CASD1Q96PB1 797 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 SORCS2Q96PQ0 1159 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 ADAM2Q99965 735 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 KXD1Q9BQD3 176 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 MRPL9Q9BYD2 267 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 TRIM4Q9C037 500 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 NT5C3AQ9H0P0 336 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 BRD9Q9H8M2 597 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 MLXIPQ9HAP2 919 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 MRPL17Q9NRX2 175 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 INTS7Q9NVH2 962 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 SAE1Q9UBE0 346 aaPredicted RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 SSX2IPQ9Y2D8 614 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 TNPO3Q9Y5L0 923 aaKnown RBP6.04□□□□□ -1.44
AP3S1-202ENST00000395548 TRPV2Q9Y5S1 764 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 AHCTF1Q8WYP5 2266 aa6.04□□□□□ -1.44
AP3S1-202ENST00000395548 MYH8P13535 1937 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 MYH15Q9Y2K3 1946 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 IGSF9BQ9UPX0 1349 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 NBPF19A0A087WUL8 3843 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 APAF1O14727 1248 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 PRPF3O43395 683 aaKnown RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 SLC26A4O43511 780 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 OPHN1O60890 802 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 RFPL2O75678 378 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 TCEA3O75764 348 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 GGPS1O95749 300 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 CNPP09543 421 aaKnown RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 TGFB3P10600 412 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 TRIM27P14373 513 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 NEK3P51956 506 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 BCAR1P56945 870 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms