RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 ITGAVP06756 1048 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 C1SP09871 688 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 CXADRP78310 365 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 ZBTB16Q05516 673 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 E2F5Q15329 346 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 KNOP1Q1ED39 458 aaKnown RBP14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 C1orf220Q5T0J3 134 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 PPP1R26Q5T8A7 1209 aaPredicted RBP14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 UNC13DQ70J99 1090 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 SV2AQ7L0J3 742 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 KIAA0907Q7Z7F0 614 aaPredicted RBP14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 ERICH1Q86X53 443 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 SPACA3Q8IXA5 215 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 WFDC5Q8TCV5 224 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 FGF11Q92914 225 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 DHX58Q96C10 678 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 CDK5RAP1Q96SZ6 601 aaKnown RBP14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 C7orf25Q9BPX7 421 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 DUSP16Q9BY84 665 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 SEMA4CQ9C0C4 833 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 BLZF1Q9H2G9 400 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 ABCB8Q9NUT2 735 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
CHCHD2-201ENST00000395422 A0A1W2PR77 199 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 C10orf142B7Z368 130 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 PYCARD-AS1I3L0S3 204 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 EPHA8P29322 1005 aaPredicted RBP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 SGSHP51688 502 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 GALCP54803 685 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 KCNJ12Q14500 433 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 TRIP4Q15650 581 aaPredicted RBP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 MPPE1Q53F39 396 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 NCEH1Q6PIU2 408 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 WFIKKN2Q8TEU8 576 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 NDRG1Q92597 394 aaKnown RBP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 TMEM176AQ96HP8 235 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 NT5C1AQ9BXI3 368 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 LRRC27Q9C0I9 530 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 DMAC2Q9NW81 257 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 CGNQ9P2M7 1197 aaKnown RBP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 GGA2Q9UJY4 613 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 COL5A1P20908 1838 aaPredicted RBP14.08□□□□□ -0.16
CHCHD2-201ENST00000395422 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 DLDP09622 509 aaKnown RBP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 CDK4P11802 303 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 PABPC1P11940 636 aaKnown RBP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 CD58P19256 250 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 ABCB4P21439 1286 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 CD70P32970 193 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 BNIP3Q12983 259 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 TBC1D25Q3MII6 688 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 TTC31Q49AM3 519 aaPredicted RBP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 MBLAC2Q68D91 279 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 ZNF776Q68DI1 518 aaPredicted RBP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 BHLHA9Q7RTU4 235 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 TAF4BQ92750 862 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 PLD4Q96BZ4 506 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 MYO19Q96H55 970 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 RSPH9Q9H1X1 276 aaPredicted RBP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 PABPC3Q9H361 631 aaKnown RBP14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 CUEDC2Q9H467 287 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 FBRSQ9HAH7 460 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 FBXL12Q9NXK8 326 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 STRIP2Q9ULQ0 834 aa14.07□□□□□ -0.16
CHCHD2-201ENST00000395422 NAV2Q8IVL1 2488 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 ERVH48-1M5A8F1 160 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 NASPP49321 788 aaPredicted RBP14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 INSM1Q01101 510 aaPredicted RBP14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 AMPD3Q01432 767 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 PDE4CQ08493 712 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 SFMBT2Q5VUG0 894 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 USP30Q70CQ3 517 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 RSRC2Q7L4I2 434 aaKnown RBP14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 KANSL1Q7Z3B3 1105 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 PIGZQ86VD9 579 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 FMNL3Q8IVF7 1028 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 AHI1Q8N157 1196 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 STOML2Q9UJZ1 356 aa14.06□□□□□ -0.16
CHCHD2-201ENST00000395422 HECTD1Q9ULT8 2610 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 A0A1W2PP55 124 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 MID1O15344 667 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 SIN3BO75182 1162 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 SYT1P21579 422 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 GLDCP23378 1020 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 CD38P28907 300 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 NXPH1P58417 271 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 CUL4AQ13619 759 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 ZNF394Q53GI3 561 aa14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 TAF1BQ53T94 588 aaPredicted RBP14.05□□□□□ -0.16
CHCHD2-201ENST00000395422 SHC4Q6S5L8 630 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms