RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CHST9Q7L1S5 443 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 ADAT2Q7Z6V5 191 aaKnown RBP16.54■□□□□ 0.24
SNCA-205ENST00000394991 KIAA0895Q8NCT3 520 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 WFIKKN2Q8TEU8 576 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 SLC6A18Q96N87 628 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 KCTD10Q9H3F6 313 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 CYP3A43Q9HB55 503 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 STRIP2Q9ULQ0 834 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 COL6A6A6NMZ7 2263 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 MGAQ8IWI9 3026 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 VILLO15195 856 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
SNCA-205ENST00000394991 DNTTP04053 509 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 WNT1P04628 370 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 JUPP14923 745 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
SNCA-205ENST00000394991 BCAT1P54687 386 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 YWHAGP61981 247 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNCA-205ENST00000394991 SEMG2Q02383 582 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 ZBTB16Q05516 673 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 STK4Q13043 487 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 MPPE1Q53F39 396 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 C6orf118Q5T5N4 469 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 KIAA0895LQ68EN5 471 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 RSRC2Q7L4I2 434 aaKnown RBP16.53■□□□□ 0.24
SNCA-205ENST00000394991 BHLHA9Q7RTU4 235 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 KIAA0907Q7Z7F0 614 aaPredicted RBP16.53■□□□□ 0.24
SNCA-205ENST00000394991 GRAMD1CQ8IYS0 662 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNCA-205ENST00000394991 WFDC5Q8TCV5 224 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 TMEM174Q8WUU8 243 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 PLD4Q96BZ4 506 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 MTG2Q9H4K7 406 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 FBRSQ9HAH7 460 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 MAGEF1Q9HAY2 307 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 SGK2Q9HBY8 427 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 ABCB8Q9NUT2 735 aa16.53■□□□□ 0.24
SNCA-205ENST00000394991 KLRC4O43908 158 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 CUTAO60888 179 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 RFPL3O75679 317 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 NR3C1P04150 777 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 AFMP43652 599 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 ACADVLP49748 655 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 SGSHP51688 502 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 RACK1P63244 317 aaKnown RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 PDE4CQ08493 712 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 TARDBPQ13148 414 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNCA-205ENST00000394991 TTC31Q49AM3 519 aaPredicted RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 RAB41Q5JT25 222 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 HES3Q5TGS1 186 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 PIGZQ86VD9 579 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 ZNF843Q8N446 348 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 TAS1R2Q8TE23 839 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 NDRG1Q92597 394 aaKnown RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 CNDP2Q96KP4 475 aaKnown RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 FCRL3Q96P31 734 aaPredicted RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 ELF4Q99607 663 aaPredicted RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 ACE2Q9BYF1 805 aaPredicted RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 NIF3L1Q9GZT8 377 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
SNCA-205ENST00000394991 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 GGA2Q9UJY4 613 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 PLA2G4CQ9UP65 541 aa16.52■□□□□ 0.24
SNCA-205ENST00000394991 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.23
SNCA-205ENST00000394991 MYO18BQ8IUG5 2567 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 A0A1W2PPC4 97 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 IKBKBO14920 756 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 DFNA5O60443 496 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 LDOC1O95751 146 aaPredicted RBP16.51■□□□□ 0.23
SNCA-205ENST00000394991 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
SNCA-205ENST00000394991 HNF1BP35680 557 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 C21orf59P57076 290 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 RTP5Q14D33 572 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 CEP135Q66GS9 1140 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 MBLAC2Q68D91 279 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 ZNF776Q68DI1 518 aaPredicted RBP16.51■□□□□ 0.23
SNCA-205ENST00000394991 FBXL19Q6PCT2 694 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 PCSK4Q6UW60 755 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 LRRC69Q6ZNQ3 347 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 FMNL3Q8IVF7 1028 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 AHI1Q8N157 1196 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 SNIP1Q8TAD8 396 aaKnown RBP16.51■□□□□ 0.23
SNCA-205ENST00000394991 SAP25Q8TEE9 199 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 MYO19Q96H55 970 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
SNCA-205ENST00000394991 STOML2Q9UJZ1 356 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 AK5Q9Y6K8 562 aa16.51■□□□□ 0.23
SNCA-205ENST00000394991 FAM47DPA6NHR8 397 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 C10orf142B7Z368 130 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 TULP2O00295 520 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 WNT9AO14904 365 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 DLDP09622 509 aaKnown RBP16.5■□□□□ 0.23
SNCA-205ENST00000394991 TRIM49P0CI25 452 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 TRIM49CP0CI26 452 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 CD70P32970 193 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 GCLMP48507 274 aa16.5■□□□□ 0.23
SNCA-205ENST00000394991 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms