RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 TRIM68Q6AZZ1 485 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 DENND5BQ6ZUT9 1274 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 ECHDC2Q86YB7 292 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 TMEM86AQ8N2M4 240 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 STARD13Q9Y3M8 1113 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 UGT1A9O60656 530 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 EDF1O60869 148 aaKnown RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 CD52P31358 61 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 DEUP1Q05D60 604 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 DPYSQ14117 519 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 PRKD1Q15139 912 aaPredicted RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 TRMT10BQ6PF06 316 aaKnown RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 C4orf22Q6V702 233 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 LBHD1Q9BQE6 289 aaPredicted RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 CEP41Q9BYV8 373 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 UGT1A7Q9HAW7 530 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 UGT1A10Q9HAW8 530 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 UGT1A8Q9HAW9 530 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 PADI3Q9ULW8 664 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 STAP1Q9ULZ2 295 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 GIT1Q9Y2X7 761 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 MYO18AQ92614 2054 aaKnown RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 A0A0A0MRY4 1105 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 GSTA1P08263 222 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 INHBAP08476 426 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 USP17L7P0C7H9 530 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 FLT3LGP49771 235 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 HHATQ5VTY9 493 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 DSTYKQ6XUX3 929 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 MRPL10Q7Z7H8 261 aaKnown RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 SLC7A14Q8TBB6 771 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 ZNF75CPQ92670 426 aaPredicted RBP14.4□□□□□ -0.1
SNCA-204ENST00000394989 GRAMD1AQ96CP6 724 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 SPATA13Q96N96 652 aa14.4□□□□□ -0.1
SNCA-204ENST00000394989 IQANK1A0A1B0GTG1 560 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 ASGR1P07306 291 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 KCNJ2P63252 427 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 SLC18A2Q05940 514 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 CD300LGQ6UXG3 332 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 SLC26A11Q86WA9 606 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 PPM1NQ8N819 430 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 LRRC8CQ8TDW0 803 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 P2RY11Q96G91 374 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 HACD1B0YJ81 288 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 DCLK1O15075 740 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 TM9SF1O15321 606 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 SEPT4O43236 478 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 APOEP02649 317 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 SLC8A1P32418 973 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 THPOP40225 353 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 ETV4P43268 484 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 NEK3P51956 506 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 NKX3-2P78367 333 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 RNF43Q68DV7 783 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 RFX8Q6ZV50 586 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 AGAP11Q8TF27 550 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 PTPRN2Q92932 1015 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 EBNA1BP2Q99848 306 aaKnown RBP14.39□□□□□ -0.11
SNCA-204ENST00000394989 IKBKGQ9Y6K9 419 aa14.39□□□□□ -0.11
SNCA-204ENST00000394989 COL4A4P53420 1690 aaPredicted RBP14.39□□□□□ -0.11
SNCA-204ENST00000394989 GPR182O15218 404 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 POMCP01189 267 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 MT-ND3P03897 115 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CSH1P0DML2 217 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CSH2P0DML3 217 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 PYGBP11216 843 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CACNB2Q08289 660 aaPredicted RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 SEMA3BQ13214 749 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 ALKBH8Q96BT7 664 aaKnown RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 RXFP1Q9HBX9 757 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CDH9Q9ULB4 789 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 WDR91A4D1P6 747 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 C9IYK1 514 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 H3BRJ5 948 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 RNF103O00237 685 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 FBXO21O94952 628 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 ADRA1BP35368 520 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 GLUD2P49448 558 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 AP1B1Q10567 949 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 WASHC5Q12768 1159 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 BNIP1Q12981 228 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 PAFAH1B3Q15102 231 aaKnown RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 THEMIS2Q5TEJ8 643 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CDHR3Q6ZTQ4 885 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 OTOAQ7RTW8 1153 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CTAGE3PQ8IX95 158 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 HACE1Q8IYU2 909 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 PRDM12Q9H4Q4 367 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 CSNK1G1Q9HCP0 422 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 KLHL14Q9P2G3 628 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.113e-6■■■■■ 137.9
SNCA-204ENST00000394989 HMX2A2RU54 273 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms