RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 FAM170AA1A519 330 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 GTPBP10A4D1E9 387 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 C1QTNF9BB2RNN3 333 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 I6L893 689 aaPredicted RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 GIPC1O14908 333 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 MAP3K13O43283 966 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 THAP12O43422 761 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 ACSL4O60488 711 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 FBXO21O94952 628 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 LATS1O95835 1130 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 C1QTNF9P0C862 333 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 NCAM1P13591 858 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 CSRP1P21291 193 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 GNA15P30679 374 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 DPP6P42658 865 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 HARS2P49590 506 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 TBX4P57082 545 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 RING1Q06587 406 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 CETN1Q12798 172 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 LMAN2Q12907 356 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 PDCLQ13371 301 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 MEA1Q16626 185 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 EXOC3L4Q17RC7 722 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 MPPE1Q53F39 396 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 ZC3H12AQ5D1E8 599 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 FSCBQ5H9T9 825 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 GBP6Q6ZN66 633 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 MMS22LQ6ZRQ5 1243 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 TRMT11Q7Z4G4 463 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 ANKS1BQ7Z6G8 1248 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 SLC47A2Q86VL8 602 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 PASD1Q8IV76 773 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 FAM71AQ8IYT1 594 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 PGBD3Q8N328 593 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 TMA16Q96EY4 203 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 PRMT1Q99873 361 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 NAA15Q9BXJ9 866 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 SLC2A11Q9BYW1 496 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 TMEM245Q9H330 911 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 PLCB1Q9NQ66 1216 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 ANLNQ9NQW6 1124 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 ST7Q9NRC1 585 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 ABCB8Q9NUT2 735 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 USP36Q9P275 1121 aaKnown RBP9.21□□□□□ -0.94
ATG4A-205ENST00000394892 DNAJC12Q9UKB3 198 aa9.21□□□□□ -0.94
ATG4A-205ENST00000394892 EPHB6O15197 1021 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 TBL1XO60907 577 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 ERBB2P04626 1255 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 TFE3P19532 575 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 IRAK1P51617 712 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 RPL6Q02878 288 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 BYSLQ13895 437 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 COL9A2Q14055 689 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 MAN2A1Q16706 1144 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 UAP1L1Q3KQV9 507 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 PREPLQ4J6C6 727 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 PTPN20Q4JDL3 420 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 DCAF6Q58WW2 860 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 RBM43Q6ZSC3 357 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 CHST9Q7L1S5 443 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 BEND5Q7L4P6 421 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 LPCAT2Q7L5N7 544 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 ENOSF1Q7L5Y1 443 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 METTL3Q86U44 580 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 CREBRFQ8IUR6 639 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 SYT12Q8IV01 421 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 CFAP52Q8N1V2 620 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 C1orf131Q8NDD1 294 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 OR2I1PQ8NGU4 316 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 AZIN2Q96A70 460 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 ZNF419Q96HQ0 510 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 MRGPRX3Q96LB0 322 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 SLC2A13Q96QE2 648 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 NUSAP1Q9BXS6 441 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 CIPCQ9C0C6 399 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 NDST4Q9H3R1 872 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 CAPN10Q9HC96 672 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 ITM2CQ9NQX7 267 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 WSB2Q9NYS7 404 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 EVLQ9UI08 416 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 RALYQ9UKM9 306 aaKnown RBP9.2□□□□□ -0.94
ATG4A-205ENST00000394892 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 FHOD1Q9Y613 1164 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 RALGAPA1Q6GYQ0 2036 aa9.2□□□□□ -0.94
ATG4A-205ENST00000394892 CNOT1A5YKK6 2376 aaKnown RBP9.19□□□□□ -0.94
ATG4A-205ENST00000394892 KCNU1A8MYU2 1149 aa9.19□□□□□ -0.94
ATG4A-205ENST00000394892 C10orf142B7Z368 130 aa9.19□□□□□ -0.94
ATG4A-205ENST00000394892 IRAK2O43187 625 aa9.19□□□□□ -0.94
ATG4A-205ENST00000394892 GRAP2O75791 330 aa9.19□□□□□ -0.94
ATG4A-205ENST00000394892 FGFR1OPO95684 399 aaKnown RBP9.19□□□□□ -0.94
ATG4A-205ENST00000394892 TRUB2O95900 331 aaKnown RBP9.19□□□□□ -0.94
ATG4A-205ENST00000394892 CYBBP04839 570 aa9.19□□□□□ -0.94
ATG4A-205ENST00000394892 PABPC1P11940 636 aaKnown RBP9.19□□□□□ -0.94
ATG4A-205ENST00000394892 MAOBP27338 520 aa9.19□□□□□ -0.94
ATG4A-205ENST00000394892 USP8P40818 1118 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms