RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SUSD3Q96L08 255 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 B3GALT6Q96L58 329 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 HCSTQ9UBK5 93 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 SFMBT1Q9UHJ3 866 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 THSD7BQ9C0I4 1608 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 TDRD15B5MCY1 1934 aaKnown RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 A0A0A0MRY4 1105 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 A0A1W2PQ45 241 aaPredicted RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 A0A1W2PQY0 241 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 HGSO14964 777 aaPredicted RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 SNX3O60493 162 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 INHAP05111 366 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 ATP2A2P16615 1042 aaKnown RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 PSMB4P28070 264 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 OR1G1P47890 313 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 GPR15P49685 360 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 GATMP50440 423 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 NR1H3Q13133 447 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 SEMA3BQ13214 749 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 DNAJC3Q13217 504 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 PM20D1Q6GTS8 502 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 PSTKQ8IV42 348 aaKnown RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 ZNF567Q8N184 647 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 MICALL1Q8N3F8 863 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 SPATA13Q96N96 652 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 SIK2Q9H0K1 926 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 SLCO1B3Q9NPD5 702 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 DMAP1Q9NPF5 467 aaPredicted RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 SAMD15Q9P1V8 674 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 RCOR3Q9P2K3 495 aaPredicted RBP15.54■□□□□ 0.08
GPC3-202ENST00000394299 SLC17A7Q9P2U7 560 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 OR12D3Q9UGF7 316 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 NUP205Q92621 2012 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 PRPF4O43172 522 aaKnown RBP eCLIP15.53■□□□□ 0.089e-8■■□□□ 12.7
GPC3-202ENST00000394299 SRGAP2BP0DMP2 458 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 GRIK1P39086 918 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 TPI1P60174 286 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 YWHAHQ04917 246 aaPredicted RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 PAFAH1B3Q15102 231 aaKnown RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 PRKD1Q15139 912 aaPredicted RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 SLC39A12Q504Y0 691 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 SPATS2Q86XZ4 545 aaKnown RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.53■□□□□ 0.08
GPC3-202ENST00000394299 SLC44A1Q8WWI5 657 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 RNF34Q969K3 372 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 MAGEB18Q96M61 343 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 AGAP3Q96P47 875 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 SLC17A6Q9P2U8 582 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 MSI1O43347 362 aaKnown RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 RPLP2P05387 115 aaKnown RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 MAGEA3P43357 314 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 SESN2P58004 480 aaPredicted RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 SEMA5AQ13591 1074 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 LVRNQ6Q4G3 990 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 GLB1LQ6UWU2 654 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 CCDC121Q6ZUS5 278 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 SLC24A5Q71RS6 500 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 PID1Q7Z2X4 250 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 SCN4BQ8IWT1 228 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 THEM5Q8N1Q8 247 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 MCUQ8NE86 351 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 TCP10LQ8TDR4 215 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 DQX1Q8TE96 717 aaKnown RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 CELF6Q96J87 481 aaKnown RBP15.53■□□□□ 0.08
GPC3-202ENST00000394299 STARD7Q9NQZ5 370 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 GGA2Q9UJY4 613 aa15.53■□□□□ 0.08
GPC3-202ENST00000394299 GOLGA6L7A0A1B0GV03 622 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 WDR27A2RRH5 827 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 VGLL3A8MV65 326 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 USP12O75317 370 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 LRIG2O94898 1065 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 CPP00450 1065 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 ADRA1DP25100 572 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 CXCR3P49682 368 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 SLC5A3P53794 718 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 IL9RQ01113 521 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 RASA2Q15283 850 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.08
GPC3-202ENST00000394299 GPR152Q8TDT2 470 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 CCT6BQ92526 530 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 NTAN1Q96AB6 310 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 SGSM3Q96HU1 749 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 SLC9A7Q96T83 725 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 TBC1D13Q9NVG8 400 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 ABI2Q9NYB9 513 aaPredicted RBP15.52■□□□□ 0.08
GPC3-202ENST00000394299 IL1RAPL1Q9NZN1 696 aa15.52■□□□□ 0.08
GPC3-202ENST00000394299 HACD1B0YJ81 288 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CABYRO75952 493 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 INHBAP08476 426 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CSH1P0DML2 217 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CSH2P0DML3 217 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 EPHB2P29323 1055 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 MAGEA9P43362 315 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 TSPY1Q01534 308 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 BMPR2Q13873 1038 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 PDK1Q15118 436 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 DDR2Q16832 855 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 NOMO2Q5JPE7 1267 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CES3Q6UWW8 571 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms