RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 SOX5P35711 763 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 KIAA1211LQ6NV74 962 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 SLC26A9Q7LBE3 791 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 DHX40Q8IX18 779 aaKnown RBP24.03■■□□□ 1.44
HMGA2-202ENST00000393577 GPR161Q8N6U8 529 aaKnown RBP24.03■■□□□ 1.44
HMGA2-202ENST00000393577 NEK11Q8NG66 645 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 SLC20A1Q8WUM9 679 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 ZC3H10Q96K80 434 aaKnown RBP24.03■■□□□ 1.44
HMGA2-202ENST00000393577 IRX2Q9BZI1 471 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-202ENST00000393577 CIPCQ9C0C6 399 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 DUSP15Q9H1R2 295 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-202ENST00000393577 ELOVL2Q9NXB9 296 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 COX16Q9P0S2 106 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 STIM2Q9P246 746 aa24.03■■□□□ 1.44
HMGA2-202ENST00000393577 THAP10Q9P2Z0 257 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-202ENST00000393577 WASH3PC4AMC7 463 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 LSM8O95777 96 aaKnown RBP24.02■■□□□ 1.44
HMGA2-202ENST00000393577 GABRG2P18507 467 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 TGM1P22735 817 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 HLA-FP30511 346 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 EIF4HQ15056 248 aaKnown RBP24.02■■□□□ 1.44
HMGA2-202ENST00000393577 MPP7Q5T2T1 576 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 TMEM215Q68D42 235 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 ERICH1Q86X53 443 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 ZDHHC17Q8IUH5 632 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 HJURPQ8NCD3 748 aaPredicted RBP24.02■■□□□ 1.44
HMGA2-202ENST00000393577 OLIG1Q8TAK6 271 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 WFDC5Q8TCV5 224 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 RLN3Q8WXF3 142 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 SORCS1Q8WY21 1168 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 MYEOVQ96EZ4 313 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 ERGIC2Q96RQ1 377 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 ABCB8Q9NUT2 735 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 DDIT4Q9NX09 232 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 NOCTQ9UK39 431 aaKnown RBP24.02■■□□□ 1.44
HMGA2-202ENST00000393577 STON1Q9Y6Q2 735 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 ABCA7Q8IZY2 2146 aa24.02■■□□□ 1.44
HMGA2-202ENST00000393577 THADAQ6YHU6 1953 aa24.02■■□□□ 1.43
HMGA2-202ENST00000393577 SMTNL1A8MU46 457 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 EPN2O95208 641 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 BCKDHBP21953 392 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 STAT1P42224 750 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 IL12RB1P42701 662 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 RPS24P62847 133 aaKnown RBP24.01■■□□□ 1.43
HMGA2-202ENST00000393577 NOMO3P69849 1222 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 EIF4EBP2Q13542 120 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-202ENST00000393577 ELF2Q15723 593 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 KLHL40Q2TBA0 621 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 MS4A13Q5J8X5 152 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 NAA35Q5VZE5 725 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 RAP1GAP2Q684P5 730 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 ZNF677Q86XU0 584 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 ZNF397Q8NF99 534 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-202ENST00000393577 WFIKKN2Q8TEU8 576 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 CPA5Q8WXQ8 436 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 C18orf8Q96DM3 657 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 LOXL4Q96JB6 756 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 BTN2A3PQ96KV6 586 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 FUCA2Q9BTY2 467 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 CD248Q9HCU0 757 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 GGA2Q9UJY4 613 aa24.01■■□□□ 1.43
HMGA2-202ENST00000393577 DMXL1Q9Y485 3027 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 PLXND1Q9Y4D7 1925 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 TYW5A2RUC4 315 aaKnown RBP24■■□□□ 1.43
HMGA2-202ENST00000393577 NPC1O15118 1278 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 LRP3O75074 770 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 RHOBTB1O94844 696 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 PABPC1P11940 636 aaKnown RBP24■■□□□ 1.43
HMGA2-202ENST00000393577 P2RY2P41231 377 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 GABRB2P47870 512 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 ZNF165P49910 485 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 ARID5AQ03989 594 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 ZNF234Q14588 700 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 C2CD6Q53TS8 623 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 RNF43Q68DV7 783 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 CHST9Q7L1S5 443 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 C11orf74Q86VG3 221 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 CHSY1Q86X52 802 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 XYLT1Q86Y38 959 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 MFN1Q8IWA4 741 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 ATP6V0D2Q8N8Y2 350 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 RNF34Q969K3 372 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 SPACA7Q96KW9 195 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 ARRDC1-AS1Q9H2J1 176 aa24■■□□□ 1.43
HMGA2-202ENST00000393577 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24■■□□□ 1.432e-7■■■■□ 24.5
HMGA2-202ENST00000393577 ZBTB24O43167 697 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-202ENST00000393577 NDUFV2P19404 249 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 TACR2P21452 398 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 NOS2P35228 1153 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 RNASE9P60153 205 aaKnown RBP23.99■■□□□ 1.43
HMGA2-202ENST00000393577 FMO1Q01740 532 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 CDR2Q01850 454 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 NME3Q13232 169 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 FAM102AQ5T9C2 384 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-202ENST00000393577 LGI2Q8N0V4 545 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 AHI1Q8N157 1196 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 CFAP52Q8N1V2 620 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.99■■□□□ 1.43
HMGA2-202ENST00000393577 MSANTD4Q8NCY6 345 aa23.99■■□□□ 1.43
HMGA2-202ENST00000393577 SEMA4GQ9NTN9 838 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms