RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 DRICH1Q6PGQ1 229 aaPredicted RBP16.82■□□□□ 0.28
PHTF1-205ENST00000393357 KCNT2Q6UVM3 1135 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 XKR5Q6UX68 686 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 FASTKD5Q7L8L6 764 aaKnown RBP16.82■□□□□ 0.28
PHTF1-205ENST00000393357 C7orf31Q8N865 590 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 GIPC3Q8TF64 312 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 B3GNT5Q9BYG0 378 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 PLAC1Q9HBJ0 212 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 GMPR2Q9P2T1 348 aaKnown RBP16.82■□□□□ 0.28
PHTF1-205ENST00000393357 FAM149AA5PLN7 773 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 E7ESA3 106 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 NR4A1P22736 598 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 HSP90AA5PQ58FG0 334 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 MTX3Q5HYI7 312 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 RPS27LQ71UM5 84 aaKnown RBP16.82■□□□□ 0.28
PHTF1-205ENST00000393357 SCUBE3Q8IX30 993 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 PQLC3Q8N755 202 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 PNPLA1Q8N8W4 532 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 NLRP4Q96MN2 994 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 LGMNQ99538 433 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 XPNPEP3Q9NQH7 507 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 LTFP02788 710 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 MX2P20592 715 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 POLR2BP30876 1174 aaKnown RBP16.81■□□□□ 0.28
PHTF1-205ENST00000393357 GNL1P36915 607 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-205ENST00000393357 WASHC5Q12768 1159 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 MPP3Q13368 585 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 NAPRTQ6XQN6 538 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 C15orf52Q6ZUT6 534 aaKnown RBP16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 TMEM192Q8IY95 271 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 NCSTNQ92542 709 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 RPL10LQ96L21 214 aaKnown RBP16.81■□□□□ 0.28
PHTF1-205ENST00000393357 FBXL18Q96ME1 805 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 OMDQ99983 421 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 PPCSQ9HAB8 311 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 UBP1Q9NZI7 540 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SAC3D1A6NKF1 404 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SETSIPP0DME0 302 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 PSMC3P17980 439 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 AOC1P19801 751 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 KCNJ11Q14654 390 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 LPIN1Q14693 890 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 AMHR2Q16671 573 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 TMEM259Q4ZIN3 620 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 MBLAC2Q68D91 279 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 ZNF786Q8N393 782 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 NLRP7Q8WX94 980 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 VCPIP1Q96JH7 1222 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SLC4A5Q9BY07 1137 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 TBXAS1P24557 533 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-205ENST00000393357 CHRNA5P30532 468 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SLC5A3P53794 718 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 PCLAFQ15004 111 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 IL23RQ5VWK5 629 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 KDELC2Q7Z4H8 507 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 DSELQ8IZU8 1212 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 LARGE2Q8N3Y3 721 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 TSPAN14Q8NG11 270 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 FAM110BQ8TC76 370 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 LRTOMTQ8WZ04 291 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SLC39A3Q9BRY0 314 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 TRIM8Q9BZR9 551 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-205ENST00000393357 RRN3Q9NYV6 651 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 EMCNQ9ULC0 261 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 GINS2Q9Y248 185 aa16.81■□□□□ 0.28
PHTF1-205ENST00000393357 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 ARHGEF37A1IGU5 675 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 J3QRK9 145 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TNFAIP8O95379 198 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 JUNP05412 331 aaKnown RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 UGT1A6P19224 532 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 CAP2P40123 477 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 PLOD1Q02809 727 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 CRY2Q49AN0 593 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 LDLRAP1Q5SW96 308 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 OGFOD2Q6N063 350 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 AAGABQ6PD74 315 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 KYAT3Q6YP21 454 aaKnown RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 FBXL8Q96CD0 374 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 KCNK16Q96T55 309 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 SUDS3Q9H7L9 328 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TCF7L2Q9NQB0 619 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 EBF1Q9UH73 591 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 BLOC1S6Q9UL45 172 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 ZNF232Q9UNY5 417 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 AURKCQ9UQB9 309 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 ARHGAP10A1A4S6 786 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 PLOD2O00469 737 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TRUB2O95900 331 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms