RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 MCCC1Q96RQ3 725 aaPredicted RBP8.37□□□□□ -1.07
LIMS1-203ENST00000393310 SYT15Q9BQS2 421 aa8.37□□□□□ -1.07
LIMS1-203ENST00000393310 HEBP1Q9NRV9 189 aa8.37□□□□□ -1.07
LIMS1-203ENST00000393310 KLC4Q9NSK0 619 aa8.37□□□□□ -1.07
LIMS1-203ENST00000393310 SUCOQ9UBS9 1254 aaKnown RBP8.37□□□□□ -1.07
LIMS1-203ENST00000393310 DMGDHQ9UI17 866 aaKnown RBP8.37□□□□□ -1.07
LIMS1-203ENST00000393310 SNX6Q9UNH7 406 aa8.37□□□□□ -1.07
LIMS1-203ENST00000393310 TLDC2A0PJX2 215 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ZSCAN9O15535 394 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TGM5O43548 720 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PLEKHA8P1O95397 391 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 VCLP18206 1134 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 VCPP55072 806 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 CSNK2BP67870 215 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 EIF4HQ15056 248 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ZNF699Q32M78 642 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ZNF776Q68DI1 518 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 DNAJB7Q7Z6W7 309 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 NOSTRINQ8IVI9 506 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TTC8Q8TAM2 541 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TM9SF4Q92544 642 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 CPB2Q96IY4 423 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 C10orf88Q9H8K7 445 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ATXN10Q9UBB4 475 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 FBXW11Q9UKB1 542 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 STAP1Q9ULZ2 295 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TMCO1Q9UM00 188 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 C2CD2Q9Y426 696 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TPRP12270 2363 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 LINC01565O15544 149 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 MAN1A2O60476 641 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 DLATP10515 647 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ADH5P11766 374 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 BOLA3Q53S33 107 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 GLRA4Q5JXX5 417 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TMA16Q96EY4 203 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TTC25Q96NG3 672 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 POLE3Q9NRF9 147 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 DDX19AQ9NUU7 478 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ITGA11Q9UKX5 1188 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 CDH9Q9ULB4 789 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 FAM169AQ9Y6X4 670 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PRRC2BQ5JSZ5 2229 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TTC28Q96AY4 2481 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ITGAXP20702 1163 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 DGKGP49619 791 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 DUSP4Q13115 394 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 POLD3Q15054 466 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TEAD2Q15562 447 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 MANEAQ5SRI9 462 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PLA2G4FQ68DD2 849 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 NCCRP1Q6ZVX7 275 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 IL22RA1Q8N6P7 574 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 BCAS4Q8TDM0 211 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 HEXIM2Q96MH2 286 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PGLYRP2Q96PD5 576 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 AGO3Q9H9G7 860 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ACAD8Q9UKU7 415 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 HBS1LQ9Y450 684 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 STK36Q9NRP7 1315 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 A0A1W2PQD8 194 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 TCRBV21S2A2A0A5A6 115 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 FAM205CA6NFA0 338 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ABCB7O75027 752 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ATF2P15336 505 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 CDK17Q00537 523 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 OCA2Q04671 838 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 SLC14A1Q13336 389 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 RETSATQ6NUM9 610 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 RINT1Q6NUQ1 792 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 PRSS55Q6UWB4 352 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ADGRF2Q8IZF7 708 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 KCNE4Q8WWG9 221 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 SLC5A5Q92911 643 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 DMAP1Q9NPF5 467 aaPredicted RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 HPS4Q9NQG7 708 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
LIMS1-203ENST00000393310 FARSBQ9NSD9 589 aaKnown RBP8.36□□□□□ -1.07
LIMS1-203ENST00000393310 SGK1O00141 431 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 ENC1O14682 589 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 KRT6AP02538 564 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 KRT6BP04259 564 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 ADRB1P08588 477 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 HSMCR30P0CW71 290 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 TIE1P35590 1138 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 PEX5P50542 639 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 SEC13P55735 322 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 GTF2H3Q13889 308 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 KLHL35Q6PF15 583 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 ATG14Q6ZNE5 492 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 MON1AQ86VX9 555 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 CCDC33Q8N5R6 958 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 SEC14L1Q92503 715 aa8.35□□□□□ -1.07
LIMS1-203ENST00000393310 HSPH1Q92598 858 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms