RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CLCN6P51797 869 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 ATXN1P54253 815 aaKnown RBP14.07□□□□□ -0.16
PTN-202ENST00000393083 CDH6P55285 790 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 PITX1P78337 314 aaPredicted RBP14.07□□□□□ -0.16
PTN-202ENST00000393083 KRT81Q14533 505 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 ARHGAP15Q53QZ3 475 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 SYPL2Q5VXT5 272 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 TXNDC8Q6A555 127 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 MAATS1Q7Z4T9 603 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 MON1AQ86VX9 555 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 ST13P5Q8NFI4 369 aaPredicted RBP14.07□□□□□ -0.16
PTN-202ENST00000393083 C1orf54Q8WWF1 131 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 RSAD2Q8WXG1 361 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 SMARCD2Q92925 531 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 RPP25Q9BUL9 199 aaKnown RBP14.07□□□□□ -0.16
PTN-202ENST00000393083 TRPV4Q9HBA0 871 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 IGSF9Q9P2J2 1179 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 NCOR1O75376 2440 aa14.07□□□□□ -0.16
PTN-202ENST00000393083 SYNJ2BP-COX16A0A087WUM0 186 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 CCDC151A5D8V7 595 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 M0QYT0 321 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 MDM4O15151 490 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 TTI1O43156 1089 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 ERLIN1O75477 346 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 FYNP06241 537 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 CD48P09326 243 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 ZDHHC11BP0C7U3 371 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 NCAM1P13591 858 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 DDX6P26196 483 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTN-202ENST00000393083 WEE1P30291 646 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 COILP38432 576 aaPredicted RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 FNTAP49354 379 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 PGFP49763 221 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 DR1Q01658 176 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 DHX34Q14147 1143 aaKnown RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 BOLA3Q53S33 107 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 SNX30Q5VWJ9 437 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 TTC27Q6P3X3 843 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 CCDC137Q6PK04 289 aaKnown RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 ZSCAN18Q8TBC5 510 aaPredicted RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 ATG4AQ8WYN0 398 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 EDEM1Q92611 657 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 FBXO32Q969P5 355 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 NT5C3BQ969T7 300 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 NXPE3Q969Y0 559 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 HINFPQ9BQA5 517 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 TRIM62Q9BVG3 475 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 CALN1Q9BXU9 219 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 DCLK3Q9C098 648 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 FBXO44Q9H4M3 255 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 TRPM5Q9NZQ8 1165 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 COX16Q9P0S2 106 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 CALCOCO1Q9P1Z2 691 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 ZMYM5Q9UJ78 669 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 SCML2Q9UQR0 700 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 R3HDM2Q9Y2K5 976 aaKnown RBP14.06□□□□□ -0.16
PTN-202ENST00000393083 NUMBLQ9Y6R0 609 aa14.06□□□□□ -0.16
PTN-202ENST00000393083 OBSL1O75147 1896 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 ZSCAN5CA6NGD5 496 aaPredicted RBP14.05□□□□□ -0.16
PTN-202ENST00000393083 ARSEP51690 589 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 YWHAGP61981 247 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTN-202ENST00000393083 DEUP1Q05D60 604 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 ADCY2Q08462 1091 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 SNX1Q13596 522 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 PDK2Q15119 407 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 TAZQ16635 292 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 ZC3H12AQ5D1E8 599 aaKnown RBP14.05□□□□□ -0.16
PTN-202ENST00000393083 ERMARDQ5T6L9 678 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 BSPRYQ5W0U4 402 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 TANGO2Q6ICL3 276 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 MTSS1LQ765P7 747 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 BNIPLQ7Z465 357 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 FAM131BQ86XD5 332 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 RFX6Q8HWS3 928 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 ARID3BQ8IVW6 561 aaPredicted RBP14.05□□□□□ -0.16
PTN-202ENST00000393083 CMTM8Q8IZV2 173 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 CCDC185Q8N715 623 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 MAB21L3Q8N8X9 362 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 PDZD8Q8NEN9 1154 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 SLC22A12Q96S37 553 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 TRIM51Q9BSJ1 452 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 LRRC19Q9H756 370 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 FAM204AQ9H8W3 233 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 RRN3Q9NYV6 651 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 GMIPQ9P107 970 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 PCYOX1Q9UHG3 505 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 MUTYHQ9UIF7 546 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 RASAL2Q9UJF2 1139 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 AP4E1Q9UPM8 1137 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 EFR3BQ9Y2G0 817 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 DENND4CQ5VZ89 1909 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 C2orf78A6NCI8 922 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
PTN-202ENST00000393083 ECI2O75521 394 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms