RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SERPINA6P08185 405 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PCP11498 1178 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PTPN2P17706 415 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 MUTP22033 750 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 HOXA7P31268 230 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SOX5P35711 763 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CDK8P49336 464 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PKNOX1P55347 436 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CACNB1Q02641 598 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 MTM1Q13496 603 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 DGKDQ16760 1214 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 AARS2Q5JTZ9 985 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PDPK2PQ6A1A2 396 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CASC4Q6P4E1 433 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PHC2Q8IXK0 858 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 METTL25Q8N6Q8 603 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SLC22A8Q8TCC7 542 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PTCD3Q96EY7 689 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SIPA1Q96FS4 1042 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 QKIQ96PU8 341 aaKnown RBP eCLIP7.82□□□□□ -1.166e-8■■■□□ 16.1
VTI1A-201ENST00000393077 DHRS9Q9BPW9 319 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 MXD3Q9BW11 206 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 COA1Q9GZY4 146 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 MKRN2Q9H000 416 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ANKMY1Q9P2S6 941 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ANAPC7Q9UJX3 599 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 DNAJC16Q9Y2G8 782 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CHD2O14647 1828 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CCDC182A6NF36 153 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 FAM13AO94988 1023 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 FGFR2P21802 821 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SERPINB5P36952 375 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 INPP1P49441 399 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 BNC1Q01954 994 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ADGRE1Q14246 886 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 POLD3Q15054 466 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 DGLUCYQ7Z3D6 616 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ATP6V0D2Q8N8Y2 350 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ASB12Q8WXK4 309 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SLC7A3Q8WY07 619 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SENP6Q9GZR1 1112 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SLC38A7Q9NVC3 462 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PARVAQ9NVD7 372 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 I3L521 148 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 DCXO43602 365 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CCNT2O60583 730 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 SNAP91O60641 907 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 OR7A10O76100 309 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 KCNH1O95259 989 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ZBTB7AO95365 584 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 TGDSO95455 350 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ABCB1P08183 1280 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 MSX2P35548 267 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ETFBP38117 255 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 NSFP46459 744 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ADCY7P51828 1080 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 TAGLNQ01995 201 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 GNA13Q14344 377 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 IGSF11Q5DX21 431 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CLVS2Q5SYC1 327 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ARMC4Q5T2S8 1044 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 PPP4R4Q6NUP7 873 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF544Q6NX49 715 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 KCTD1Q719H9 257 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 GPR180Q86V85 440 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 CAND1Q86VP6 1230 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 HSPH1Q92598 858 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF512BQ96KM6 892 aaPredicted RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 POLHQ9Y253 713 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 WBP11Q9Y2W2 641 aaKnown RBP7.82□□□□□ -1.16
VTI1A-201ENST00000393077 LTN1O94822 1766 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 F8W810 466 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 H3BUI4 141 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 NEMP1O14524 444 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 DYRK3O43781 588 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 NUAK1O60285 661 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ALX3O95076 343 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 NLRP11P59045 1033 aaKnown RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 TOP3AQ13472 1001 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 PXDC1Q5TGL8 231 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 KCNK18Q7Z418 384 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ANKRD13AQ8IZ07 590 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 LRRC57Q8N9N7 239 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 TDRD5Q8NAT2 981 aaKnown RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CDC26Q8NHZ8 85 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF420Q8TAQ5 688 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ACTRT2Q8TDY3 377 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 C7orf26Q96N11 449 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF347Q96SE7 839 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CNPY3Q9BT09 278 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SERHL2Q9H4I8 314 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ENTPD7Q9NQZ7 604 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 KBTBD4Q9NVX7 518 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CHORDC1Q9UHD1 332 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 MRPS7Q9Y2R9 242 aaKnown RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 KRT87PA6NCN2 255 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 TRIM49D1C9J1S8 452 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 MED26O95402 600 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms