RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RABEP1Q15276 862 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 MCMDC2Q4G0Z9 681 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SLC9B1Q4ZJI4 515 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 LIPMQ5VYY2 423 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ARHGAP11AQ6P4F7 1023 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRAT1Q6PIZ9 186 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SERPINA13PQ6UXR4 307 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CYP2R1Q6VVX0 501 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TAF8Q7Z7C8 310 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TBC1D15Q8TC07 691 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 STT3BQ8TCJ2 826 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ABHD5Q8WTS1 349 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SELENOMQ8WWX9 145 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 NMD3Q96D46 503 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 CAPS2Q9BXY5 557 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRIM31Q9BZY9 425 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRIM7Q9C029 511 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 NECTIN3Q9NQS3 549 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TMEM161AQ9NX61 479 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SSX2IPQ9Y2D8 614 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 OR6C76A6NM76 312 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 K7EPI3 171 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 POLR3GO15318 223 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 BUB1O43683 1085 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 SEC22BO75396 215 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 DIRAS3O95661 229 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 RLN1P04808 185 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 DLDP09622 509 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 GRK5P34947 590 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 HNMTP50135 292 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 GALNTL6Q49A17 601 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 Q5PR19 223 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 GARNL3Q5VVW2 1013 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 TTC19Q6DKK2 380 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 ZDHHC24Q6UX98 284 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 TMC5Q6UXY8 1006 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 SLCO4C1Q6ZQN7 724 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 NLRP10Q86W26 655 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 CLYBLQ8N0X4 340 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 BANPQ8N9N5 519 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 LPCAT1Q8NF37 534 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 HASPINQ8TF76 798 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 DYDC1Q8WWB3 177 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 ELMOD3Q96FG2 381 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 CEP95Q96GE4 821 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 ZBTB45Q96K62 511 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 DACH2Q96NX9 599 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 SRSF8Q9BRL6 282 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 CCDC94Q9BW85 323 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 NGBQ9NPG2 151 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 STK26Q9P289 416 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 DNAJB11Q9UBS4 358 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 UBA2Q9UBT2 640 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 CROTQ9UKG9 612 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 PALD1Q9ULE6 856 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 ENTPD2Q9Y5L3 495 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 WDFY3Q8IZQ1 3526 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 CCDC187A0A096LP49 1063 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 TCRBV5S4A2TA0A5A2 114 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 ARHGAP42A6NI28 874 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 WASH4PA8MWX3 477 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 MYO1FO00160 1098 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 NVLO15381 856 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 RPP40O75818 363 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 CELA3BP08861 270 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 ZNF81P51508 661 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 BLVRAP53004 296 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 RAD23AP54725 363 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 HDAC4P56524 1084 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 NKX6-1P78426 367 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 LBRQ14739 615 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 MYBPC3Q14896 1274 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 LRRC23Q53EV4 343 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 CDC73Q6P1J9 531 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 MIB1Q86YT6 1006 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 CFAP206Q8IYR0 622 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 NSUN7Q8NE18 718 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 FLAD1Q8NFF5 587 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 TNIP2Q8NFZ5 429 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 ZNF480Q8WV37 535 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 PRPF31Q8WWY3 499 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 TEX13AQ9BXU3 409 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 RAB9BQ9NP90 201 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 TMEM160Q9NX00 188 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 KCND2Q9NZV8 630 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 SUCLA2Q9P2R7 463 aaPredicted RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 TDRKHQ9Y2W6 561 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 PCDHA5Q9Y5H7 936 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 RBM8AQ9Y5S9 174 aaKnown RBP3.69□□□□□ -1.82
XRN1-202ENST00000392981 SNX9Q9Y5X1 595 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 BOLA2-SMG1P6H3BVE0 249 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 F2RL2O00254 374 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 PLOD2O00469 737 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 NKX2-2O95096 273 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 LAMP2P13473 410 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 EGR1P18146 543 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 HK1P19367 917 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 PTAFRP25105 342 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 SMSP52788 366 aa3.69□□□□□ -1.82
XRN1-202ENST00000392981 PDE1AP54750 535 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms