RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 DCLK1O15075 740 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 LPXNO60711 386 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 B3GAT3O94766 335 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 AMHP03971 560 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 CCND3P30281 292 aaPredicted RBP26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 BRCC3P46736 316 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 AIF1P55008 147 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 SLC18A2Q05940 514 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 LPIN1Q14693 890 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 GALNTL6Q49A17 601 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 CCNYQ8ND76 341 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 PRDM12Q9H4Q4 367 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 ZNF180Q9UJW8 692 aa26.4■■□□□ 1.82
SMARCD3-203ENST00000392811 A0A0U1RQF3 1178 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 RASSF9O75901 435 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 STK10O94804 968 aaKnown RBP26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 PYGBP11216 843 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 SCAPQ12770 1279 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 ECHDC2Q86YB7 292 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 TP53INP2Q8IXH6 220 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 ZNF276Q8N554 614 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 FITM2Q8N6M3 262 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 KLHDC9Q8NEP7 349 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 GSDMBQ8TAX9 411 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 THOC1Q96FV9 657 aaKnown RBP26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 APOPT1Q96IL0 206 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 CEP41Q9BYV8 373 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 CSNK1G1Q9HCP0 422 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 DDIT4Q9NX09 232 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 FBXW11Q9UKB1 542 aa26.39■■□□□ 1.82
SMARCD3-203ENST00000392811 WDR91A4D1P6 747 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 TRIM49D1C9J1S8 452 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 OPHN1O60890 802 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 ALADP13716 330 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 NEK3P51956 506 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 SARNPP82979 210 aaKnown RBP26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 SEMA3BQ13214 749 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 TRMT10BQ6PF06 316 aaKnown RBP26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 CD300LGQ6UXG3 332 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 PGAP3Q96FM1 320 aaPredicted RBP26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 ADAM2Q99965 735 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 SEPT10Q9P0V9 454 aa26.39■■□□□ 1.81
SMARCD3-203ENST00000392811 PPP1R12AO14974 1030 aaPredicted RBP26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 UGT1A9O60656 530 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 HNRNPH1P31943 449 aaKnown RBP26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 CDK16Q00536 496 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 WASHC5Q12768 1159 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 CCSAPQ6IQ19 270 aaPredicted RBP26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 PDCD7Q8N8D1 485 aaKnown RBP26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 HASPINQ8TF76 798 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 EDEM1Q92611 657 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 ACBD6Q9BR61 282 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 UGT1A7Q9HAW7 530 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 UGT1A10Q9HAW8 530 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 UGT1A8Q9HAW9 530 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 RXFP1Q9HBX9 757 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 INPP5FQ9Y2H2 1132 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 PCDHA11Q9Y5I1 949 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 CSH1P0DML2 217 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 CSH2P0DML3 217 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 ERCC2P18074 760 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 FAM171BQ6P995 826 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 METTL23Q86XA0 190 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 GBP7Q8N8V2 638 aaPredicted RBP26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 FERMT1Q9BQL6 677 aa26.38■■□□□ 1.81
SMARCD3-203ENST00000392811 FAM159BA6NKW6 160 aa26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 KRT37O76014 449 aa26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 CYP11A1P05108 521 aa26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 SNRPAP09012 282 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 CAP1Q01518 475 aa26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 INTS6LQ5JSJ4 861 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 VPS11Q9H270 941 aa26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 EIF2B3Q9NR50 452 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 ABT1Q9ULW3 272 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 TDRD15B5MCY1 1934 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-203ENST00000392811 MLNP12872 115 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 BDNFP23560 247 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 TPI1P60174 286 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 GRIK3Q13003 919 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 OTOAQ7RTW8 1153 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 ZNF567Q8N184 647 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 STAMBPL1Q96FJ0 436 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 COLEC11Q9BWP8 271 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 TMLHEQ9NVH6 421 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 RRN3Q9NYV6 651 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 PSMB4P28070 264 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 ETV4P43268 484 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 BNIP1Q12981 228 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 PGBD4Q96DM1 585 aa26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 TRMT13Q9NUP7 481 aaKnown RBP26.36■■□□□ 1.81
SMARCD3-203ENST00000392811 MYO18AQ92614 2054 aaKnown RBP26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 HGSO14964 777 aaPredicted RBP26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 DHRS4L1P0CG22 281 aa26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 PRKAR2AP13861 404 aaKnown RBP26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 HCAR3P49019 387 aa26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 TUSC3Q13454 348 aa26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 PARP6Q2NL67 630 aa26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 LGSNQ5TDP6 509 aa26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 LRRC8BQ6P9F7 803 aa26.35■■□□□ 1.81
SMARCD3-203ENST00000392811 ANKLE1Q8NAG6 615 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms