RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 NCDNQ9UBB6 729 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 TRIM24O15164 1050 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 ZBTB24O43167 697 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-203ENST00000391855 MAP3K13O43283 966 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 TSPAN3O60637 253 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 RPP40O75818 363 aaKnown RBP13.14□□□□□ -0.31
GGPS1-203ENST00000391855 SERPINC1P01008 464 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 ABCB4P21439 1286 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 MS4A13Q5J8X5 152 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 ACBD5Q5T8D3 534 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-203ENST00000391855 EMC10Q5UCC4 262 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-203ENST00000391855 EGFLAMQ63HQ2 1017 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 PRR23BQ6ZRT6 265 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 ARCQ7LC44 396 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 XYLT1Q86Y38 959 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 SFTPA1Q8IWL2 248 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 GPR161Q8N6U8 529 aaKnown RBP13.14□□□□□ -0.31
GGPS1-203ENST00000391855 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 GABRG3Q99928 467 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
GGPS1-203ENST00000391855 KCNU1A8MYU2 1149 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 F5H5T6 163 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 TEX33O43247 280 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 HRO43593 1189 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 TBL1XO60907 577 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ADAM23O75077 832 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 GRAP2O75791 330 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 F9P00740 461 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 CHRNB2P17787 502 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 MMP8P22894 467 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 SLC6A4P31645 630 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 NSFP46459 744 aaKnown RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 PXNP49023 591 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 GSCP56915 257 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 CENPCQ03188 943 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 GEN1Q17RS7 908 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 USP39Q53GS9 565 aaKnown RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 SND1Q7KZF4 910 aaKnown RBP eCLIP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 CHSY1Q86X52 802 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 MFN1Q8IWA4 741 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 RNF34Q969K3 372 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 P2RY11Q96G91 374 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 NPY6RQ99463 290 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 HINFPQ9BQA5 517 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ELOVL2Q9NXB9 296 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 THAP10Q9P2Z0 257 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 GGA2Q9UJY4 613 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ATG2BQ96BY7 2078 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 M0QYT0 321 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 LRP3O75074 770 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 CALB1P05937 261 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 UNGP13051 313 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 TACR2P21452 398 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 HLA-FP30511 346 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 SULT1E1P49888 294 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 PITX1P78337 314 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ARID5AQ03989 594 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 ENPP2Q13822 863 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 STARD3Q14849 445 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 FIGNQ5HY92 759 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 RABGAP1LQ5R372 815 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 RFWD3Q6PCD5 774 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 KIAA0907Q7Z7F0 614 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 LUZP1Q86V48 1076 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 MDGA1Q8NFP4 955 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 NT5C3BQ969T7 300 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 NUP58Q9BVL2 599 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 CIPCQ9C0C6 399 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 NUCKS1Q9H1E3 243 aaKnown RBP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
GGPS1-203ENST00000391855 HCN2Q9UL51 889 aa13.13□□□□□ -0.31
GGPS1-203ENST00000391855 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 TCRBV21S2A2A0A5A6 115 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 ANTXRLA6NF34 631 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 FOXD2O60548 495 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-203ENST00000391855 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
GGPS1-203ENST00000391855 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms