RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DENND2CQ68D51 928 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ISM2Q6H9L7 571 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KIAA1841Q6NSI8 718 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TIGD7Q6NT04 549 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IRGCQ6NXR0 463 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SEM1Q6ZVN7 128 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 OTOP1Q7RTM1 612 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF572Q7Z3I7 529 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 UBE3BQ7Z3V4 1068 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TMC4Q7Z404 712 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ABI3BPQ7Z7G0 1075 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM135Q86UB9 458 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC9B2Q86UD5 537 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 VASH2Q86V25 355 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 OSTM1Q86WC4 334 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF227Q86WZ6 799 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 NME9Q86XW9 330 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PLD3Q8IV08 490 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 NOSTRINQ8IVI9 506 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 YAF2Q8IY57 180 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TRMT2AQ8IZ69 625 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM61Q8N0U2 210 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CIARTQ8N365 385 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CD177Q8N6Q3 437 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF614Q8N883 585 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 C19orf47Q8N9M1 422 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KBTBD3Q8NAB2 608 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNH5Q8NCM2 988 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 Q8NDZ9 215 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GSTCDQ8NEC7 633 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KLHL30-AS1Q8NEE0 82 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IL31RAQ8NI17 732 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PCDH19Q8TAB3 1148 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GABPB2Q8TAK5 448 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TBC1D15Q8TC07 691 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PHOSPHO2Q8TCD6 241 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 U2AF1L4Q8WU68 220 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF296Q8WUU4 475 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM174Q8WUU8 243 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 DCAF4Q8WV16 495 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 OSCP1Q8WVF1 389 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 DEDD2Q8WXF8 326 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KCTD13Q8WZ19 329 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM190Q8WZ59 177 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PIGKQ92643 395 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FBXW5Q969U6 566 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 DHX58Q96C10 678 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 R3HDM4Q96D70 268 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 OMA1Q96E52 524 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SIPA1Q96FS4 1042 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PRR11Q96HE9 360 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RNPC3Q96LT9 517 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF354BQ96LW1 612 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 HS6ST2Q96MM7 605 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CFAP57Q96MR6 1250 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 COL21A1Q96P44 957 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PUS7Q96PZ0 661 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FERD3LQ96RJ6 166 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TUBGCP5Q96RT8 1024 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PIP5K1AQ99755 562 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SOSTQ9BQB4 213 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ORAI3Q9BRQ5 295 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LMF2Q9BU23 707 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LRRC61Q9BV99 259 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TUBB2BQ9BVA1 445 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PANK2Q9BZ23 570 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 AMBRA1Q9C0C7 1298 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 NUAK2Q9H093 628 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 DHX33Q9H6R0 707 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 AAMDCQ9H7C9 122 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 EBF2Q9HAK2 575 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IFT122Q9HBG6 1241 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RETNQ9HD89 108 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC52A3Q9NQ40 469 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SNX15Q9NRS6 342 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ABCF3Q9NUQ8 709 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SLTMQ9NWH9 1034 aaKnown RBP eCLIP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GAR1Q9NY12 217 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PODXL2Q9NZ53 605 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RCC2Q9P258 522 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KLHL8Q9P2G9 620 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF624Q9P2J8 865 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CACNG5Q9UF02 275 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 NDOR1Q9UHB4 597 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF107Q9UII5 783 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RIMKLBQ9ULI2 386 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GABRQQ9UN88 632 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GNEQ9Y223 722 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PLAAQ9Y263 795 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MRPS28Q9Y2Q9 187 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 B3GALT1Q9Y5Z6 326 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RAD54BQ9Y620 910 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SIRT4Q9Y6E7 314 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PNPLA7Q6ZV29 1317 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 HERC2O95714 4834 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KIAA1109Q2LD37 5005 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ARID1AO14497 2285 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 APCP25054 2843 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 NCOR2Q9Y618 2525 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms