RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 WNT1P04628 370 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 RFPL3SP0C7P2 107 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 HOXB2P14652 356 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 MMP8P22894 467 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 SLC8A1P32418 973 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
TRAV40-201ENST00000390467 ERV3-1Q14264 604 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 SEMA3AQ14563 771 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 SMTNL2Q2TAL5 461 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 P3H1Q32P28 736 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 COBLL1Q53SF7 1204 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 MANEAQ5SRI9 462 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 HIBCHQ6NVY1 386 aaPredicted RBP3.86□□□□□ -1.79
TRAV40-201ENST00000390467 MSANTD2Q6P1R3 559 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 TLDC1Q6P9B6 456 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 CCDC150Q8NCX0 1101 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 SARGQ9BW04 601 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 MRPL44Q9H9J2 332 aaKnown RBP3.86□□□□□ -1.79
TRAV40-201ENST00000390467 MLXIPQ9HAP2 919 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 DECR2Q9NUI1 292 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 RGL1Q9NZL6 768 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 SPATA31A5Q5VU36 1347 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 EMSYQ7Z589 1322 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 SPATA31A7Q8IWB4 1347 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 KIR2DS5A0A0G2JLQ3 304 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 GXYLT2A0PJZ3 443 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 KIR2DS3K7RE56 304 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 PCDH17O14917 1159 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 NPC1O15118 1278 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 USP12O75317 370 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 SYF2O95926 243 aaKnown RBP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 VIPP01282 170 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 MYL3P08590 195 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 ITGA5P08648 1049 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 AKR1A1P14550 325 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 ALDH7A1P49419 539 aaKnown RBP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 PPATQ06203 517 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 NSUN2Q08J23 767 aaKnown RBP eCLIP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 UBAP2Q5T6F2 1119 aaKnown RBP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 LIPMQ5VYY2 423 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 DDIASQ8IXT1 998 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 TMEM199Q8N511 208 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 B4GALNT2Q8NHY0 566 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 EIF3CQ99613 913 aaKnown RBP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 NAA15Q9BXJ9 866 aaKnown RBP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.85□□□□□ -1.79
TRAV40-201ENST00000390467 HIPK2Q9H2X6 1198 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 UTS2RQ9UKP6 389 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 B3GNT3Q9Y2A9 372 aa3.85□□□□□ -1.79
TRAV40-201ENST00000390467 NOTCH4Q99466 2003 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 J3KTA2 159 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 PPP6R2O75170 966 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 TAF5LO75529 589 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 PARNO95453 639 aaKnown RBP3.84□□□□□ -1.79
TRAV40-201ENST00000390467 ENO1P06733 434 aaKnown RBP3.84□□□□□ -1.79
TRAV40-201ENST00000390467 CBSLP0DN79 551 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 CHRNB1P11230 501 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 PLA2G2AP14555 144 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 IDEP14735 1019 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 TNFSF4P23510 183 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 CBSP35520 551 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 CDKN2AP42771 156 aaKnown RBP3.84□□□□□ -1.79
TRAV40-201ENST00000390467 MAPKAPK3Q16644 382 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 ANXA2RQ3ZCQ2 193 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 KIAA1755Q5JYT7 1200 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 PIK3CD-AS1Q5SR53 167 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 LVRNQ6Q4G3 990 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 B4GALNT4Q76KP1 1039 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 KRT27Q7Z3Y8 459 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 TXLNBQ8N3L3 684 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 KAT2BQ92831 832 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 MCRS1Q96EZ8 462 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 ZNF347Q96SE7 839 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 NUDT22Q9BRQ3 303 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 TRIM2Q9C040 744 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 KCNK9Q9NPC2 374 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 STARD7Q9NQZ5 370 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 PCDHB7Q9Y5E2 793 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 CNTNAP2Q9UHC6 1331 aa3.84□□□□□ -1.79
TRAV40-201ENST00000390467 M0QYT0 321 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 PODXLO00592 558 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 SRGAP2BP0DMP2 458 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 PEPDP12955 493 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 ARRB2P32121 409 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 POLD2P49005 469 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 P2RX3P56373 397 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 SLC37A1P57057 533 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 IFIT5Q13325 482 aaKnown RBP3.83□□□□□ -1.8
TRAV40-201ENST00000390467 PTGR1Q14914 329 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 DLGAP5Q15398 846 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 SAFBQ15424 915 aaKnown RBP eCLIP3.83□□□□□ -1.8
TRAV40-201ENST00000390467 ARL13BQ3SXY8 428 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 FAM209BQ5JX69 171 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 RBMXL3Q8N7X1 1067 aaKnown RBP3.83□□□□□ -1.8
TRAV40-201ENST00000390467 EXD3Q8N9H8 876 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 OR52N4Q8NGI2 321 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 SLC22A17Q8WUG5 538 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 C18orf8Q96DM3 657 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 ZNF479Q96JC4 524 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 ERVK-5Q9HDB9 667 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms