RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 PSMD12O00232 456 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-202ENST00000382381 CLTBP09497 229 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 SLC2A3P11169 496 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 VDRP11473 427 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 GIT2Q14161 759 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 SETD3Q86TU7 594 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-202ENST00000382381 ZNF677Q86XU0 584 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
ABCA3-202ENST00000382381 DDX18Q9NVP1 670 aaKnown RBP13.2□□□□□ -0.3
ABCA3-202ENST00000382381 MGAT1P26572 445 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 ACOX1Q15067 660 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 GRIK5Q16478 980 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 FAM171A1Q5VUB5 890 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 EFL1Q7Z2Z2 1120 aaKnown RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 TMEM39AQ9NV64 488 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 CCDC167Q9P0B6 97 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 SOX6P35712 828 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 HNF4AP41235 474 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 PRAMEF19Q5SWL8 479 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 RNF44Q7L0R7 432 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 MILR1Q7Z6M3 343 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 ZBTB46Q86UZ6 589 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 PARP8Q8N3A8 854 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 TMEM176AQ96HP8 235 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 APBA2Q99767 749 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 KLHL20Q9Y2M5 609 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 FOXP2O15409 715 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 VAPBO95292 243 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 ADSLP30566 484 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 KRT20P35900 424 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 IRX1P78414 480 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 N4BP2L1Q5TBK1 243 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 NEK10Q6ZWH5 1172 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 ZNF438Q7Z4V0 828 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 SYBUQ9NX95 663 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 MPP6Q9NZW5 540 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 C1orf232A0A0U1RR37 186 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 KPNA3O00505 521 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 SUPT20HL2P0C7V6 817 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 RAG1P15918 1043 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 IGFBP4P22692 258 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 KLRC2P26717 231 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 NMRK1Q9NWW6 199 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 CTNNAL1Q9UBT7 734 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 FAM20BO75063 409 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 SEC22BO75396 215 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 MSH3P20585 1137 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 CRADDP78560 199 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 PKN1Q16512 942 aa13.19□□□□□ -0.3
ABCA3-202ENST00000382381 GFM2Q969S9 779 aaKnown RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
ABCA3-202ENST00000382381 IFRD1O00458 451 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ITGAXP20702 1163 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 SCTRP47872 440 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 NDST1P52848 882 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 BCAT1P54687 386 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 EPHB3P54753 998 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 BTN2A1Q7KYR7 527 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 NETO2Q8NC67 525 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 OLFM1Q99784 485 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 MID1IP1Q9NPA3 183 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 FAM50BQ9Y247 325 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 A0A1W2PQJ5 194 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 DYRK3O43781 588 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ATG7O95352 703 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 GLI1P08151 1106 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 DUSP12Q9UNI6 340 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 UBDO15205 165 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 TIMM44O43615 452 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 CRTAMO95727 393 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ALDH2P05091 517 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 CCDC130P13994 396 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 FMO4P31512 558 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ELK3P41970 407 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 AP5B1Q2VPB7 878 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 C19orf18Q8NEA5 215 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ZBTB45Q96K62 511 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 DPY30Q9C005 99 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms