RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IL1R2P27930 398 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 CDH6P55285 790 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ZNF252P-AS1Q0IIN9 211 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 N4BP2L1Q5TBK1 243 aaPredicted RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 GRAMD4Q6IC98 578 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ARL10Q8N8L6 244 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 JOSD2Q8TAC2 188 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 EME1Q96AY2 570 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 CDRT15Q96T59 188 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 GPATCH2LQ9NWQ4 482 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ZNF180Q9UJW8 692 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 TMEM191CA6NGB0 347 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 ARIH2O95376 493 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 TMEM191BP0C7N4 346 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 CSH1P0DML2 217 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 CSH2P0DML3 217 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 RPL10P27635 214 aaKnown RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 TNFSF9P41273 254 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 ZNF132P52740 706 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 PSMC1P62191 440 aaKnown RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 ITGA9Q13797 1035 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 LY6KQ17RY6 165 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 TMEM132AQ24JP5 1023 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 PLEKHA7Q6IQ23 1121 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 KLHL35Q6PF15 583 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 LPCAT2Q7L5N7 544 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 ZNF554Q86TJ5 538 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 PPWD1Q96BP3 646 aaKnown RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 NRBP2Q9NSY0 501 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 DRG1Q9Y295 367 aaKnown RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 MGAMO43451 1857 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 STRNO43815 780 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 CD1EP15812 388 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 TCF7P36402 384 aaPredicted RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 PHF13Q86YI8 300 aaPredicted RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 PQLC1Q8N2U9 271 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.25□□□□□ -0.13
SDC1-202ENST00000381150 RNF169Q8NCN4 708 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 SEPT1Q8WYJ6 367 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 SSU72Q9NP77 194 aaKnown RBP14.25□□□□□ -0.13
SDC1-202ENST00000381150 NDUFA13Q9P0J0 144 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 TXNDC16Q9P2K2 825 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 ZNF510Q9Y2H8 683 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 FAM58BPP0C7Q3 252 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 OSBPP22059 807 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 CDH15P55291 814 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 AAGABQ6PD74 315 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 METTL7BQ6UX53 244 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 ZPBP2Q6X784 338 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 GRIN3AQ8TCU5 1115 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 CMTM5Q96DZ9 223 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 THAP1Q9NVV9 213 aa14.25□□□□□ -0.13
SDC1-202ENST00000381150 IGKV6-21A0A0C4DH24 114 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 STX16-NPEPL1H3BU86 382 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 KLHL2O95198 593 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 DHRS4L1P0CG22 281 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 CPOXP36551 454 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 IGBP1P78318 339 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 PPM1JQ5JR12 505 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 CES3Q6UWW8 571 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 TMEM35BQ8NCS4 154 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 NKD2Q969F2 451 aaPredicted RBP14.24□□□□□ -0.13
SDC1-202ENST00000381150 VCPIP1Q96JH7 1222 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 C7orf26Q96N11 449 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 ZNF358Q9NW07 568 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 A0A0G2JLL6 359 aaPredicted RBP14.24□□□□□ -0.13
SDC1-202ENST00000381150 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 HSPA4LO95757 839 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 ZBED1O96006 694 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 BPGMP07738 259 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 SLC5A2P31639 672 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 MAGEA8P43361 318 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 SESN2P58004 480 aaPredicted RBP14.24□□□□□ -0.13
SDC1-202ENST00000381150 ATP1A4Q13733 1029 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 PPM1LQ5SGD2 360 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 PRRT2Q7Z6L0 340 aaPredicted RBP14.24□□□□□ -0.13
SDC1-202ENST00000381150 BRSK2Q8IWQ3 736 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 SLC35B2Q8TB61 432 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 GIPC3Q8TF64 312 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 RMI1Q9H9A7 625 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 ARHGAP26Q9UNA1 814 aa14.24□□□□□ -0.13
SDC1-202ENST00000381150 DNAJA2O60884 412 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 AMHP03971 560 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 CCDC166P0CW27 439 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 SMIM18P0DKX4 95 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ITGAXP20702 1163 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ETFBP38117 255 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ENTPD1P49961 510 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 LPIN1Q14693 890 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 HSDL1Q3SXM5 330 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 ANKRD23Q86SG2 305 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 GAB3Q8WWW8 586 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 YIPF2Q9BWQ6 316 aa14.23□□□□□ -0.13
SDC1-202ENST00000381150 PAIP1Q9H074 479 aaKnown RBP14.23□□□□□ -0.13
SDC1-202ENST00000381150 WDR55Q9H6Y2 383 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms