RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 COL9A1P20849 921 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 SDC4P31431 198 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 RFC1P35251 1148 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-201ENST00000381140 EIF4A3P38919 411 aaKnown RBP20.1■□□□□ 0.81
GTF3A-201ENST00000381140 EIF2DP41214 584 aaKnown RBP20.1■□□□□ 0.81
GTF3A-201ENST00000381140 MAGEA9P43362 315 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 SGSHP51688 502 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 ATXN1P54253 815 aaKnown RBP20.1■□□□□ 0.81
GTF3A-201ENST00000381140 MTAPQ13126 283 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 ARID5BQ14865 1188 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 C15orf59Q2T9L4 293 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-201ENST00000381140 DCUN1D2Q6PH85 259 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 LGI2Q8N0V4 545 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 EZH1Q92800 747 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-201ENST00000381140 AZIN2Q96A70 460 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 ZNF653Q96CK0 615 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 BTN2A3PQ96KV6 586 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 MCEEQ96PE7 176 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 DNAJC7Q99615 494 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 ABHD10Q9NUJ1 306 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 STIM2Q9P246 746 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 MYO1AQ9UBC5 1043 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 STOML2Q9UJZ1 356 aa20.1■□□□□ 0.81
GTF3A-201ENST00000381140 A0A087X0T9 212 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 TBC1D3BA6NDS4 549 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 C2CD4BA6NLJ0 364 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 SIGLEC16A6NMB1 481 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 GALR2O43603 387 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-201ENST00000381140 TBL1XO60907 577 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 F9P00740 461 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 PENKP01210 267 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-201ENST00000381140 FAM228BP0C875 321 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 GPD1P21695 349 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 DGKGP49619 791 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 GSCP56915 257 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-201ENST00000381140 EIF4EBP2Q13542 120 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-201ENST00000381140 PPP2R5DQ14738 602 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 WDR59Q6PJI9 974 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 ARCQ7LC44 396 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 NT5C3BQ969T7 300 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 VCPIP1Q96JH7 1222 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 PANX2Q96RD6 677 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 KCNF1Q9H3M0 494 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 DEF6Q9H4E7 631 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 WDCPQ9H6R7 721 aa20.09■□□□□ 0.81
GTF3A-201ENST00000381140 CNOT8Q9UFF9 292 aaKnown RBP20.09■□□□□ 0.81
GTF3A-201ENST00000381140 ANTXRLA6NF34 631 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 KCNU1A8MYU2 1149 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 TACR2P21452 398 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 HNRNPH3P31942 346 aaKnown RBP20.08■□□□□ 0.81
GTF3A-201ENST00000381140 RDXP35241 583 aaKnown RBP20.08■□□□□ 0.81
GTF3A-201ENST00000381140 GGCXP38435 758 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 GRIA2P42262 883 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 CXCR3P49682 368 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 RPL7AP62424 266 aaKnown RBP20.08■□□□□ 0.81
GTF3A-201ENST00000381140 GAS6Q14393 721 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 CCDC14Q49A88 953 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 RAB6CQ53S08 254 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 C10orf76Q5T2E6 689 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 SH3PXD2AQ5TCZ1 1133 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 PIK3R6Q5UE93 754 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 PKN3Q6P5Z2 889 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 CFAP52Q8N1V2 620 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 CCDC112Q8NEF3 446 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 MYEOVQ96EZ4 313 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 PRICKLE1Q96MT3 831 aaPredicted RBP20.08■□□□□ 0.81
GTF3A-201ENST00000381140 TKTL2Q9H0I9 626 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 SIK2Q9H0K1 926 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 RAB6CQ9H0N0 254 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 CLEC4EQ9ULY5 219 aa20.08■□□□□ 0.81
GTF3A-201ENST00000381140 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.08■□□□□ 0.81
GTF3A-201ENST00000381140 TCRBV5S1A1TA0A578 114 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 TYW5A2RUC4 315 aaKnown RBP20.08■□□□□ 0.8
GTF3A-201ENST00000381140 F5H5T6 163 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 K7EQS6 105 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 LAMTOR5O43504 91 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PAGE1O75459 146 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 FECHP22830 423 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 HOXD9P28356 352 aaPredicted RBP20.08■□□□□ 0.8
GTF3A-201ENST00000381140 RPS24P62847 133 aaKnown RBP20.08■□□□□ 0.8
GTF3A-201ENST00000381140 FBXO43Q4G163 708 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PREPLQ4J6C6 727 aaPredicted RBP20.08■□□□□ 0.8
GTF3A-201ENST00000381140 C2orf27AQ580R0 203 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 MS4A13Q5J8X5 152 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 CCDC122Q5T0U0 273 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 FAM131BQ86XD5 332 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 C1orf210Q8IVY1 113 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PHTF2Q8N3S3 785 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 SYNPOQ8N3V7 929 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 TERB1Q8NA31 727 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 HJURPQ8NCD3 748 aaPredicted RBP20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PRSS33Q8NF86 280 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 RPLP0P6Q8NHW5 317 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PGAP3Q96FM1 320 aaPredicted RBP20.08■□□□□ 0.8
GTF3A-201ENST00000381140 ZDHHC4Q9NPG8 344 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 TMPRSS4Q9NRS4 437 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PARVAQ9NVD7 372 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 PAXBP1Q9Y5B6 917 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 SNX10Q9Y5X0 201 aa20.08■□□□□ 0.8
GTF3A-201ENST00000381140 CCZ1BP86790 482 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms