RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 F8W810 466 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 APRTP07741 180 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 SELPP16109 830 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 ANKRD20A2Q5SQ80 823 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 ANKRD20A1Q5TYW2 823 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 ANKRD20A3Q5VUR7 823 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 CAPN12Q6ZSI9 719 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 DCAKDQ8WVC6 231 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 PAFAH2Q99487 392 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 ZCWPW1Q9H0M4 648 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 XAB2Q9HCS7 855 aaKnown RBP19.85■□□□□ 0.77
GMDS-201ENST00000380805 COX16Q9P0S2 106 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM169AQ9Y6X4 670 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 KIAA0100Q14667 2235 aaKnown RBP19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM72CH0Y354 149 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 NCAM2O15394 837 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 AMHP03971 560 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 MLNP12872 115 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 CYP2C18P33260 490 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAXCQ5TGI0 409 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM72AQ5TYM5 149 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 GKAP1Q5VSY0 366 aaPredicted RBP19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM72DQ6L9T8 149 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 PDZD4Q76G19 769 aaPredicted RBP19.85■□□□□ 0.77
GMDS-201ENST00000380805 PIGWQ7Z7B1 504 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 TAC4Q86UU9 113 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM72BQ86X60 149 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 ADAM32Q8TC27 787 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 DENND1AQ8TEH3 1009 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 LGMNQ99538 433 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FERMT1Q9BQL6 677 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 BRD8Q9H0E9 1235 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 TRABDQ9H4I3 376 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.85■□□□□ 0.77
GMDS-201ENST00000380805 TANC1Q9C0D5 1861 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 CREB3O43889 395 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 FAM155BO75949 473 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 ERCC2P18074 760 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 STX2P32856 288 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 EFTUD2Q15029 972 aaKnown RBP eCLIP19.84■□□□□ 0.772e-13■■■■■ 57.2
GMDS-201ENST00000380805 CPLX4Q7Z7G2 160 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 SPATA2LQ8IUW3 424 aaPredicted RBP19.84■□□□□ 0.77
GMDS-201ENST00000380805 DQX1Q8TE96 717 aaKnown RBP19.84■□□□□ 0.77
GMDS-201ENST00000380805 P2RY11Q96G91 374 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 FUBP3Q96I24 572 aaKnown RBP eCLIP19.84■□□□□ 0.775e-6■■■■□ 21.7
GMDS-201ENST00000380805 SEC16BQ96JE7 1060 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 PLAC1Q9HBJ0 212 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 KCNK9Q9NPC2 374 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 TMEM51Q9NW97 253 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 NKIRAS1Q9NYS0 192 aa19.84■□□□□ 0.77
GMDS-201ENST00000380805 TRDMT1O14717 391 aaKnown RBP19.83■□□□□ 0.77
GMDS-201ENST00000380805 SYN3O14994 580 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 TYROBPO43914 113 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 STK10O94804 968 aaKnown RBP19.83■□□□□ 0.77
GMDS-201ENST00000380805 PRKCHP24723 683 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 CORO7P57737 925 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 TPI1P60174 286 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 WASHC5Q12768 1159 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 FAM126BQ8IXS8 530 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 LRRC34Q8IZ02 419 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 LRRN4Q8WUT4 740 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 SLC44A1Q8WWI5 657 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 EDEM1Q92611 657 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 SIGLEC10Q96LC7 697 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 CRISPLD2Q9H0B8 497 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 OSBPL2Q9H1P3 480 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 PRDM12Q9H4Q4 367 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 WDCPQ9H6R7 721 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 ARHGEF38Q9NXL2 777 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 IGSF9Q9P2J2 1179 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 OGDHLQ9ULD0 1010 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 TTLL3Q9Y4R7 772 aa19.83■□□□□ 0.77
GMDS-201ENST00000380805 RNF103O00237 685 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 AVILO75366 819 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 KRT15P19012 456 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 IBSPP21815 317 aaPredicted RBP19.82■□□□□ 0.76
GMDS-201ENST00000380805 SLC5A3P53794 718 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 GPNMBQ14956 572 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 PLEKHG4Q58EX7 1191 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 CACNA2D3Q8IZS8 1091 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 MAGEB18Q96M61 343 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 SMC6Q96SB8 1091 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 EPAS1Q99814 870 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 NSRP1Q9H0G5 558 aaKnown RBP19.82■□□□□ 0.76
GMDS-201ENST00000380805 ABCC13Q9NSE7 274 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 IRAK2O43187 625 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 ASMTLO95671 621 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 HTR7P34969 479 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 MSH2P43246 934 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 IFNAR2P48551 515 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 PPIDQ08752 370 aaKnown RBP19.82■□□□□ 0.76
GMDS-201ENST00000380805 BFSP2Q13515 415 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 LRRC14Q15048 493 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 PARP6Q2NL67 630 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 BRMS1LQ5PSV4 323 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 CYS1Q717R9 158 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 DCP1BQ8IZD4 617 aaKnown RBP19.82■□□□□ 0.76
GMDS-201ENST00000380805 ANKRD42Q8N9B4 389 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 DYDC1Q8WWB3 177 aa19.82■□□□□ 0.76
GMDS-201ENST00000380805 HDAC11Q96DB2 347 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 794 ms