RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 FOXN1O15353 648 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 RASSF9O75901 435 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 CYP3A7P24462 503 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 GRK4P32298 578 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 HPCAL1P37235 193 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 GRM5P41594 1212 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 COPAP53621 1224 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 PPARDQ03181 441 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 CNGA3Q16281 694 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 DUSP28Q4G0W2 176 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 FAXDC2Q96IV6 333 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 C9orf72Q96LT7 481 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 PI4K2AQ9BTU6 479 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 PHACTR1Q9C0D0 580 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 EPN3Q9H201 632 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 ARHGAP28Q9P2N2 729 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 ADAM21Q9UKJ8 722 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 ENTPD4Q9Y227 616 aa7.34□□□□□ -1.23
CCDC171-201ENST00000380701 A0A087X1B8 175 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 GNG14A0A1W2PPG7 69 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 TRDMT1O14717 391 aaKnown RBP7.34□□□□□ -1.24
CCDC171-201ENST00000380701 CLTBP09497 229 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 PRKAR2AP13861 404 aaKnown RBP7.34□□□□□ -1.24
CCDC171-201ENST00000380701 SSTR3P32745 418 aaPredicted RBP7.34□□□□□ -1.24
CCDC171-201ENST00000380701 OTUD4Q01804 1114 aaKnown RBP7.34□□□□□ -1.24
CCDC171-201ENST00000380701 FMR1Q06787 632 aaKnown RBP eCLIP7.34□□□□□ -1.24
CCDC171-201ENST00000380701 ACOX1Q15067 660 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 TTI2Q6NXR4 508 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 SLC9A9Q8IVB4 645 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 TAS1R2Q8TE23 839 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 JADE3Q92613 823 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 EME1Q96AY2 570 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 OTULINQ96BN8 352 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 ZBTB9Q96C00 473 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 RMND5BQ96G75 393 aaPredicted RBP7.34□□□□□ -1.24
CCDC171-201ENST00000380701 SH2D3AQ9BRG2 576 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 SPATA5L1Q9BVQ7 753 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 SLC27A6Q9Y2P4 619 aa7.34□□□□□ -1.24
CCDC171-201ENST00000380701 MYO1GB0I1T2 1018 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 FAM220BPB1ANY3 271 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SMIM10L2AP0DMW4 78 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SMIM10L2BP0DMW5 78 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ATP6V1C1P21283 382 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 NTSP30990 170 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 GPD2P43304 727 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 MMP13P45452 471 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 GLUD2P49448 558 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CCNG1P51959 295 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ENPEPQ07075 957 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CYP51A1Q16850 503 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ATAT1Q5SQI0 421 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PAGE2Q7Z2X7 111 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 C19orf60Q96EN9 201 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CPNE1Q99829 537 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PCDHGC5Q9Y5F6 944 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 FYNP06241 537 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PTPN1P18031 435 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 DDR1Q08345 913 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 LY6KQ17RY6 165 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CBWD3Q5JTY5 395 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CBWD5Q5RIA9 395 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SEL1L3Q68CR1 1132 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PSRC1Q6PGN9 363 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 C16orf87Q6PH81 154 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CEP68Q76N32 757 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 C16orf62Q7Z3J2 963 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 FAM131BQ86XD5 332 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 AVL9Q8NBF6 648 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PPTC7Q8NI37 304 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 OR8D1Q8WZ84 308 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CPB2Q96IY4 423 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 KRT84Q9NSB2 600 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CHORDC1Q9UHD1 332 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 TSR3Q9UJK0 312 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 HPSEQ9Y251 543 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 E7ENQ6 273 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 WDR47O94967 919 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ALBP02768 609 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ENO3P13929 434 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 HK2P52789 917 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ALDH18A1P54886 795 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 TRIP4Q15650 581 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PSMD5Q16401 504 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SLC39A12Q504Y0 691 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 INTS11Q5TA45 600 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 OLFML2BQ68BL8 750 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SMYD5Q6GMV2 418 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SLC30A10Q6XR72 485 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PLD3Q8IV08 490 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 MCOLN2Q8IZK6 566 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 HNRNPLLQ8WVV9 542 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 HTR3CQ8WXA8 447 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ZNF606Q8WXB4 792 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SERAC1Q96JX3 654 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 THUMPD3Q9BV44 507 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 KCTD10Q9H3F6 313 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PARVBQ9HBI1 364 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 NDUFA13Q9P0J0 144 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 MRTO4Q9UKD2 239 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CORO2BQ9UQ03 480 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms