RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CRHR2Q13324 411 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 PLEKHG4Q58EX7 1191 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ANKRD20A2Q5SQ80 823 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ANKRD20A1Q5TYW2 823 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ANKRD20A3Q5VUR7 823 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 CDHR3Q6ZTQ4 885 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 MCUQ8NE86 351 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ZMIZ2Q8NF64 920 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 RNF139Q8WU17 664 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 TFB1MQ8WVM0 346 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 HTR3CQ8WXA8 447 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM111AQ96PZ2 611 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ULBP1Q9BZM6 244 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 AGO3Q9H9G7 860 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 IKBKGQ9Y6K9 419 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 TDRD15B5MCY1 1934 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 TTC3P53804 2025 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ARL5CA6NH57 179 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 MANSC4A6NHS7 340 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 TRIM49D1C9J1S8 452 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 APOEP02649 317 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 CSH1P0DML2 217 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 CSH2P0DML3 217 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ZFXP17010 805 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ELF3P78545 371 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 OVGP1Q12889 678 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 TRIM32Q13049 653 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 BMPR2Q13873 1038 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 PAN2Q504Q3 1202 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 TAF2Q6P1X5 1199 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 SIX6OS1Q8N1H7 587 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 KIF2BQ8N4N8 673 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 KCTD13Q8WZ19 329 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 PGLYRP2Q96PD5 576 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 MYCBPQ99417 103 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 MYLK2Q9H1R3 596 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 CHKBQ9Y259 395 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 NUMBLQ9Y6R0 609 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 DUSP11O75319 330 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 THP07101 528 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 USP17L7P0C7H9 530 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM200BP0CF97 657 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 PRKCHP24723 683 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 ETV4P43268 484 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 NEK3P51956 506 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC8A3P57103 927 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC18A2Q05940 514 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 DEUP1Q05D60 604 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 AP1B1Q10567 949 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 OLIG2Q13516 323 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SEMA5AQ13591 1074 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC26A11Q86WA9 606 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 LRRC6Q86X45 466 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC7A14Q8TBB6 771 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 C10orf82Q8WW14 230 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 P2RY11Q96G91 374 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC2A13Q96QE2 648 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 ZIC5Q96T25 663 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 EBNA1BP2Q99848 306 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SYT15Q9BQS2 421 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SENP6Q9GZR1 1112 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 CD248Q9HCU0 757 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC17A6Q9P2U8 582 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 GABRQQ9UN88 632 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 TRPV2Q9Y5S1 764 aa8.21□□□□□ -1.09
PDLIM5-204ENST00000380176 HMX2A2RU54 273 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 TM9SF1O15321 606 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 MGEA5O60502 916 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SPAG6O75602 509 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 TPSB2P20231 275 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 DAOAP59103 153 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 TPSAB1Q15661 275 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SMAD1Q15797 465 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SEPT7Q16181 437 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 TIGD5Q53EQ6 642 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SAPCD2Q86UD0 394 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM35AQ86V20 835 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 PDCD7Q8N8D1 485 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 COLGALT1Q8NBJ5 622 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 TRIB2Q92519 343 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 OXNAD1Q96HP4 312 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 MTG1Q9BT17 334 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 FRMD8Q9BZ67 464 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 PRDM12Q9H4Q4 367 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 WDR6Q9NNW5 1121 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 NPHS2Q9NP85 383 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SEPT10Q9P0V9 454 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 A0A0A0MRY4 1105 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 M0QZ92 97 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 RNF103O00237 685 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 MGRN1O60291 552 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 DHRS4L1P0CG22 281 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 GJA9P57773 515 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 WASHC5Q12768 1159 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 PRKD1Q15139 912 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms