RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 C1QBPQ07021 282 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PTRHD1Q6GMV3 140 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 KCNT2Q6UVM3 1135 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ERO1BQ86YB8 467 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 NINQ8N4C6 2090 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ALLCQ8N6M5 410 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ALG3Q92685 438 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 OTUD5Q96G74 571 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 TEX12Q9BXU0 123 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 MUC3BQ9H195 1237 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 NOL6Q9H6R4 1146 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 LMCD1Q9NZU5 365 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 RBMX2Q9Y388 322 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 NR2E1Q9Y466 385 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PCDHA11Q9Y5I1 949 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 RGSL1A5PLK6 1076 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 IL18RAPO95256 599 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 MYL3P08590 195 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 GLRA2P23416 452 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 LRPAP1P30533 357 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FMO1Q01740 532 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 C6orf52Q5T4I8 152 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 RFWD3Q6PCD5 774 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 SYTL1Q8IYJ3 562 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 TMC2Q8TDI7 906 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PURBQ96QR8 312 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 C12orf65Q9H3J6 166 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 CATSPERBQ9H7T0 1116 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 AGO4Q9HCK5 861 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 KRT84Q9NSB2 600 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 SORCS3Q9UPU3 1222 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 GNEQ9Y223 722 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 EVPLQ92817 2033 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 C2orf81A6NN90 581 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 VAPBO95292 243 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ICAM1P05362 532 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PGK2P07205 417 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 UQCRBP14927 111 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 EIF4BP23588 611 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 SPATA2LQ8IUW3 424 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FBXW8Q8N3Y1 598 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 C12orf29Q8N999 325 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 OR7A2PQ8NGA2 310 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PHF21AQ96BD5 680 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 DGCR14Q96DF8 476 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 C6orf203Q9P0P8 240 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 CDV3Q9UKY7 258 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FAM50BQ9Y247 325 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 SPTLC1O15269 473 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 OGTO15294 1046 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 CD4P01730 458 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 NDST1P52848 882 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 C15orf59Q2T9L4 293 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ZIK1Q3SY52 487 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 CIAPIN1Q6FI81 312 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 TRABD2AQ86V40 505 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 DHFR2Q86XF0 187 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FNIP1Q8TF40 1166 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 HTR3CQ8WXA8 447 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PRMT6Q96LA8 375 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 CPNE1Q99829 537 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 SMARCAD1Q9H4L7 1026 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ETNK2Q9NVF9 386 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 R3HDM2Q9Y2K5 976 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 AK5Q9Y6K8 562 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FRMPD4Q14CM0 1322 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 E5RJQ4 531 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 KATNA1O75449 491 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 ACO1P21399 889 aaKnown RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 GSCP56915 257 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 SLC1A5Q15758 541 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 KYAT1Q16773 422 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 PDZK1Q5T2W1 519 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 LLGL2Q6P1M3 1020 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FAM43BQ6ZT52 329 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 LRRN4Q8WUT4 740 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 L3MBTL3Q96JM7 780 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 KCTD14Q9BQ13 255 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-201ENST00000380152 TRIM62Q9BVG3 475 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 TIMMDC1Q9NPL8 285 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 VTI1BQ9UEU0 232 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 COG5Q9UP83 839 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 DMTF1Q9Y222 760 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 CHKBQ9Y259 395 aa4.29□□□□□ -1.72
BRCA2-201ENST00000380152 FER1L6Q2WGJ9 1857 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 CAPN8A6NHC0 703 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 G3V2T6 193 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 ANXA9O76027 345 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 GRIA4P48058 902 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 RAB14P61106 215 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 DDR2Q16832 855 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 SPANXN3Q5MJ09 141 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 PRAMEF18Q5VWM3 479 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 C4orf19Q8IY42 314 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 FLCNQ8NFG4 579 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 CAPSLQ8WWF8 208 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 FAM210AQ96ND0 272 aa4.28□□□□□ -1.72
BRCA2-201ENST00000380152 SMAD5Q99717 465 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms