RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PTPRJQ12913 1337 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 YDJCA8MPS7 323 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 PEX1O43933 1283 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 PMLP29590 882 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 FDFT1P37268 417 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 FKBP1AP62942 108 aaKnown RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 C16orf87Q6PH81 154 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 ANKS1BQ7Z6G8 1248 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 SNX32Q86XE0 403 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 CDRT15Q96T59 188 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 FRMD8Q9BZ67 464 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 MRPL46Q9H2W6 279 aaKnown RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 PLA2G4CQ9UP65 541 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 COQ4Q9Y3A0 265 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 SNCAIPQ9Y6H5 919 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 V9GYQ6 96 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF536O15090 1300 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 MOGSQ13724 837 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 HPS6Q86YV9 775 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 IGDCC3Q8IVU1 814 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 DDIASQ8IXT1 998 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 C7orf61Q8IZ16 206 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 ST6GALNAC4Q9H4F1 302 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 PLEKHA5Q9HAU0 1116 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 TELO2Q9Y4R8 837 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 LYNP07948 512 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 GNAZP19086 355 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 USP4Q13107 963 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 KLF1Q13351 362 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 PRKD1Q15139 912 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 PIWIL2Q8TC59 973 aaKnown RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 RNF157Q96PX1 679 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 A0A087WZ62 844 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 CXorf49A8MYA2 514 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 TOP3BO95985 862 aaKnown RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 ASS1P00966 412 aaKnown RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 CCDC130P13994 396 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 CXCL9Q07325 125 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 TTLL4Q14679 1199 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 RAB44Q7Z6P3 723 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 BHLHE22Q8NFJ8 381 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-202ENST00000379826 FAM192AQ9GZU8 254 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 CYP4F12Q9HCS2 524 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 TCF7L2Q9NQB0 619 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 SNX13Q9Y5W8 968 aa11.69□□□□□ -0.54
SMAD9-202ENST00000379826 TRDMT1O14717 391 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 MT-CO1P00395 513 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 THRAP10827 490 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF143P52747 638 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PHEXP78562 749 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PCSK7Q16549 785 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 NKD2Q969F2 451 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 WNK4Q96J92 1243 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 SNRNP25Q9BV90 132 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 STAP1Q9ULZ2 295 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PPP2R3BQ9Y5P8 575 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 CLUHO75153 1309 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 M0QYT0 321 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 MOCS2O96007 188 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 KPNA2P52292 529 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 CHN2P52757 468 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 RTP1P59025 263 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 FOLH1Q04609 750 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PDK1Q15118 436 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PPM1JQ5JR12 505 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 MARK2Q7KZI7 788 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 NAT8LQ8N9F0 302 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 IPMKQ8NFU5 416 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 ACO2Q99798 780 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 S100A14Q9HCY8 104 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 XPNPEP1Q9NQW7 623 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 DLEC1Q9Y238 1755 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PGAM1P18669 254 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 ABL2P42684 1182 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 PSEN1P49768 467 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 YWHAHQ04917 246 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 TCEAL1Q15170 157 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 NRF1Q16656 503 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 SEL1L3Q68CR1 1132 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 APPL2Q8NEU8 664 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 UTP4Q969X6 686 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 SENP6Q9GZR1 1112 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 TM7SF2O76062 418 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 BPGMP07738 259 aa11.68□□□□□ -0.54
SMAD9-202ENST00000379826 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
SMAD9-202ENST00000379826 COX4I1P13073 169 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms