RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 MARCOQ9UEW3 520 aaPredicted RBP18.73■□□□□ 0.59
TDP2-202ENST00000378198 CD4P01730 458 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 CDC42EP1Q00587 391 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 THOC5Q13769 683 aaKnown RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 KIZQ2M2Z5 673 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 FBXO47Q5MNV8 452 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 C6orf163Q5TEZ5 329 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 NOTUMQ6P988 496 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 LRRC74BQ6ZQY2 392 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 PAXIP1Q6ZW49 1069 aaPredicted RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 NET1Q7Z628 596 aaPredicted RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 SCUBE1Q8IWY4 988 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 PYROXD2Q8N2H3 581 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 PPFIBP2Q8ND30 876 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 RBM15BQ8NDT2 890 aaKnown RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 GTF3C2Q8WUA4 911 aaPredicted RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 EIF2AQ9BY44 585 aaKnown RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 ADAMTS10Q9H324 1103 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 SNX25Q9H3E2 840 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 XPNPEP3Q9NQH7 507 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 PLA2G4CQ9UP65 541 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 PIRO00625 290 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 HCRTO43612 131 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 TBX10O75333 385 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 TM7SF2O76062 418 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 GSRP00390 522 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 GLUD2P49448 558 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 SULT1E1P49888 294 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 ALDH18A1P54886 795 aaKnown RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 CCNA1P78396 465 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 RCN2Q14257 317 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 SLC25A52Q3SY17 297 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 GLRA4Q5JXX5 417 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 N4BP2L1Q5TBK1 243 aaPredicted RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 MBLAC2Q68D91 279 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 ZCCHC23Q6ZST2 131 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 PIWIL2Q8TC59 973 aaKnown RBP18.72■□□□□ 0.59
TDP2-202ENST00000378198 NRG4Q8WWG1 115 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 ZNF560Q96MR9 790 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 LGMNQ99538 433 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
TDP2-202ENST00000378198 KPNA7A9QM74 516 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 CIB2O75838 187 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 ALDOAP04075 364 aaKnown RBP18.71■□□□□ 0.59
TDP2-202ENST00000378198 MGAT1P26572 445 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 ADORA2AP29274 412 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 KLC1Q07866 573 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 INSCQ1MX18 579 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 UNC5BQ8IZJ1 945 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 DEFB106AQ8N104 65 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 GPRC5AQ8NFJ5 357 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 ARNTL2Q8WYA1 636 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 CDCA5Q96FF9 252 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 KATNBL1Q9H079 304 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 GDAP2Q9NXN4 497 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 EMCNQ9ULC0 261 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 ZNF236Q9UL36 1845 aa18.71■□□□□ 0.59
TDP2-202ENST00000378198 SF3B1O75533 1304 aaKnown RBP eCLIP18.71■□□□□ 0.59
TDP2-202ENST00000378198 RRN3P2A6NIE6 340 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 RNF103O00237 685 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 TPP1O14773 563 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 XPO1O14980 1071 aaKnown RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 MFSD11O43934 449 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 PLIN3O60664 434 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 FGF3P11487 239 aaPredicted RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 SKIP12755 728 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 LMO2P25791 158 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 PNPLA4P41247 253 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 IRX4P78413 519 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 KDSRQ06136 332 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 AP1B1Q10567 949 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 PDE1CQ14123 709 aaPredicted RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 PDK1Q15118 436 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 PCBP1Q15365 356 aaKnown RBP eCLIP18.7■□□□□ 0.58
TDP2-202ENST00000378198 TRMT5Q32P41 509 aaKnown RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 C16orf46Q6P387 395 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 ZNF467Q7Z7K2 595 aaPredicted RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 FAM131BQ86XD5 332 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 SCG3Q8WXD2 468 aaKnown RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 EBF4Q9BQW3 602 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 FAM96AQ9H5X1 160 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 ANGPTL2Q9UKU9 493 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 HES2Q9Y543 173 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 NR2E3Q9Y5X4 410 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 PRR5-ARHGAP8B1AHC4 643 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 DAB1O75553 588 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 TOP3BO95985 862 aaKnown RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 MMP3P08254 477 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 HOXD8P13378 290 aaPredicted RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 AOC1P19801 751 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 SLC1A6P48664 564 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 SESN2P58004 480 aaPredicted RBP18.7■□□□□ 0.58
TDP2-202ENST00000378198 ARHGAP8P85298 464 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 MDH1BQ5I0G3 518 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 TEDDM1Q5T9Z0 273 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms