RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 SHROOM1Q2M3G4 852 aaPredicted RBP17.13■□□□□ 0.33
ATXN2-201ENST00000377617 RFX4Q33E94 735 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 DCAF6Q58WW2 860 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 ATG9AQ7Z3C6 839 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 TTC30AQ86WT1 665 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 PIK3C3Q8NEB9 887 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 A0A096LPK6 155 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 COX4I1P13073 169 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 TSHRP16473 764 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 CAPZA2P47755 286 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
ATXN2-201ENST00000377617 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
ATXN2-201ENST00000377617 ZNF276Q8N554 614 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 SCAIQ8N9R8 606 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 PHACTR1Q9C0D0 580 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 LAMC1P11047 1609 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 UBE2QL1A1L167 161 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 CCDC154A6NI56 674 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 PSMD12O00232 456 aaPredicted RBP17.13■□□□□ 0.33
ATXN2-201ENST00000377617 CSHL1Q14406 222 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 BPIFB6Q8NFQ5 453 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 RP9Q8TA86 221 aaKnown RBP17.13■□□□□ 0.33
ATXN2-201ENST00000377617 SPPL2AQ8TCT8 520 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 PCYOX1Q9UHG3 505 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 MINPP1Q9UNW1 487 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
ATXN2-201ENST00000377617 EDF1O60869 148 aaKnown RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 PMPCBO75439 489 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 DBTP11182 482 aaKnown RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 PI4K2AQ9BTU6 479 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 RAVER2Q9HCJ3 691 aaKnown RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 PNMA8BQ9ULN7 279 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 SERPINA1P01009 418 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 CRABP2P29373 138 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 CHMP1BQ7LBR1 199 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 NECAB2Q7Z6G3 386 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 MYDGFQ969H8 173 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 MTMR4Q9NYA4 1195 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 FAM237BA0A1B0GVD1 139 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 ALOX15P16050 662 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 MAB21L3Q8N8X9 362 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 RASSF5Q8WWW0 418 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 VCPIP1Q96JH7 1222 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 BTBD9Q96Q07 612 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 FGFR3P22607 806 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 GRIA3P42263 894 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 TUBA1BP68363 451 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 DPYSQ14117 519 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-201ENST00000377617 TUBA1AQ71U36 451 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 KRT77Q7Z794 578 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 CPNE1Q99829 537 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 KIFC1Q9BW19 673 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 ANKEF1Q9NU02 776 aa17.12■□□□□ 0.33
ATXN2-201ENST00000377617 NEK3P51956 506 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 ST3GAL1Q11201 340 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PHKG1Q16816 387 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 ZRANB3Q5FWF4 1079 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PLET1Q6UQ28 207 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 TMC7Q7Z402 723 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 MCFD2Q8NI22 146 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PIF1Q9H611 641 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 REEP1Q9H902 201 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 SPAG4Q9NPE6 437 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.11■□□□□ 0.337e-10■□□□□ 10.9
ATXN2-201ENST00000377617 RAB26Q9ULW5 256 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 GSC2O15499 205 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PAICSP22234 425 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 FEN1P39748 380 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PSMD4P55036 377 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PSME3P61289 254 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 BNIP2Q12982 314 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 DBNDD1Q9H9R9 158 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 ADPRHL2Q9NX46 363 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 SLC12A4Q9UP95 1085 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 DOLKQ9UPQ8 538 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 SHBGP04278 402 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PABPC1P11940 636 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 ADAM17P78536 824 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PKN1Q16512 942 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 SLC7A14Q8TBB6 771 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 NMRAL1Q9HBL8 299 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 ATP7AQ04656 1500 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 BCLAF3A2AJT9 711 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 GAS2O43903 313 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 CSPG5O95196 566 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 CD151P48509 253 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 BCAP31P51572 246 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 NDUFAF6Q330K2 333 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 PDCD4Q53EL6 469 aaKnown RBP17.11■□□□□ 0.33
ATXN2-201ENST00000377617 SMARCAD1Q9H4L7 1026 aa17.11■□□□□ 0.33
ATXN2-201ENST00000377617 SNAP23O00161 211 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms