RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 HBS1LQ9Y450 684 aaKnown RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 NVLO15381 856 aaKnown RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 SNAI1O95863 264 aaPredicted RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 RARBP10826 455 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 SARNPP82979 210 aaKnown RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 SOX4Q06945 474 aaPredicted RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 TSNAXIP1Q2TAA8 658 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 SLC26A9Q7LBE3 791 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 HIPK4Q8NE63 616 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 APPL2Q8NEU8 664 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 TMEM40Q8WWA1 233 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 TTC1Q99614 292 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 FRMD8Q9BZ67 464 aaPredicted RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 PRDM12Q9H4Q4 367 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 UBP1Q9NZI7 540 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 STOML1Q9UBI4 398 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 LOC285556D6RIA3 1793 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 POU5F1BQ06416 359 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 PDE1CQ14123 709 aaPredicted RBP16.72■□□□□ 0.27
TRIM27-202ENST00000377199 TEX44Q53QW1 395 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 CAPRIN2Q6IMN6 1127 aaKnown RBP16.72■□□□□ 0.27
TRIM27-202ENST00000377199 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 HFE2Q6ZVN8 426 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 RASSF3Q86WH2 238 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRIM27-202ENST00000377199 TTC39CQ8N584 583 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 MCUQ8NE86 351 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 FAXDC2Q96IV6 333 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 TLE6Q9H808 572 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 CYP4F11Q9HBI6 524 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 KCNK4Q9NYG8 393 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SIRPGQ9P1W8 387 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 KCNH4Q9UQ05 1017 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 RPS6KL1Q9Y6S9 549 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 A0A0G2JMZ2 1700 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 LRRC37A2A6NM11 1700 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 A0A0A0MRY4 1105 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 ARHGAP42A6NI28 874 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 DNAJC6O75061 913 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 PSMG1O95456 288 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 MMP3P08254 477 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 CYP2C9P11712 490 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 TYK2P29597 1187 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SNX16P57768 344 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 KYAT1Q16773 422 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 DCAF4L1Q3SXM0 396 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 PACS1Q6VY07 963 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
TRIM27-202ENST00000377199 EFCAB3Q8N7B9 438 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 OR52K1Q8NGK4 314 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SCG3Q8WXD2 468 aaKnown RBP16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 YIPF3Q9GZM5 350 aa16.72■□□□□ 0.27
TRIM27-202ENST00000377199 KLHL8Q9P2G9 620 aaPredicted RBP16.72■□□□□ 0.27
TRIM27-202ENST00000377199 SDR42E2A6NKP2 422 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 PDHXO00330 501 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 ATP9BO43861 1147 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 HNRNPCL1O60812 293 aaKnown RBP16.71■□□□□ 0.27
TRIM27-202ENST00000377199 ZNF792Q3KQV3 632 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 C10orf107Q8IVU9 208 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 TRIM42Q8IWZ5 723 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 ENDOVQ8N8Q3 282 aaKnown RBP16.71■□□□□ 0.27
TRIM27-202ENST00000377199 UCMAQ8WVF2 138 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 CDKL2Q92772 493 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 CCDC124Q96CT7 223 aaKnown RBP16.71■□□□□ 0.27
TRIM27-202ENST00000377199 LRRC39Q96DD0 335 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 C7orf26Q96N11 449 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 PNPOQ9NVS9 261 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 LOC100653049A0A140TA62 436 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 SPECC1L-ADORA2AF8WAN1 911 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 HUS1O60921 280 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 KRT34O76011 436 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 ZFXP17010 805 aaPredicted RBP16.71■□□□□ 0.27
TRIM27-202ENST00000377199 CRHR1P34998 444 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 MAGEA3P43357 314 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 PTPN9P43378 593 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 MAP3K7CLP57077 242 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 SLC25A3Q00325 362 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 SEMA5AQ13591 1074 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 ANO7Q6IWH7 933 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 SLC7A14Q8TBB6 771 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 MTBPQ96DY7 904 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 ZFP42Q96MM3 310 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 TUBB6Q9BUF5 446 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 CAB39LQ9H9S4 337 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 SNX10Q9Y5X0 201 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
TRIM27-202ENST00000377199 FAM72CH0Y354 149 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 ZMPSTE24O75844 475 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 SETSIPP0DME0 302 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 NCF2P19878 526 aaPredicted RBP16.71■□□□□ 0.26
TRIM27-202ENST00000377199 GCKP35557 465 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms