RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 H0YHG0 523 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TNFRSF10BO14763 440 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ECI2O75521 394 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 FAM163BP0C2L3 166 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 RARGP13631 454 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 CYP11B1P15538 503 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 COILP38432 576 aaPredicted RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 MMP13P45452 471 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 RAD23BP54727 409 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 MESDQ14696 234 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ACAD10Q6JQN1 1059 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TRMT10CQ7L0Y3 403 aaKnown RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 BMP8AQ7Z5Y6 402 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 SLC4A11Q8NBS3 891 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TTC8Q8TAM2 541 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 KRT35Q92764 455 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ART4Q93070 314 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ELSPBP1Q96BH3 223 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TACO1Q9BSH4 297 aaKnown RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 NUP85Q9BW27 656 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 FOXQ1Q9C009 403 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 RABEP2Q9H5N1 569 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ZFP14Q9HCL3 533 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 PPANQ9NQ55 473 aaKnown RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 KRT82Q9NSB4 513 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 WHRNQ9P202 907 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
VRK3-202ENST00000377011 GOLGA6L7A0A1B0GV03 622 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 ARNTLO00327 626 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 SPOPO43791 374 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 CSH1P0DML2 217 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 CSH2P0DML3 217 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 SLC1A1P43005 524 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 PLTPP55058 493 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 CAV1Q03135 178 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TNFAIP8L3Q5GJ75 292 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 PPP1R26Q5T8A7 1209 aaPredicted RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 GKAP1Q5VSY0 366 aaPredicted RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 MTSS1LQ765P7 747 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 CACNA2D3Q8IZS8 1091 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 FBXL6Q8N531 539 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 FBXO25Q8TCJ0 367 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 ZNF653Q96CK0 615 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 MED10Q9BTT4 135 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TASP1Q9H6P5 420 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 SLC2A4RGQ9NR83 387 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 HEBP1Q9NRV9 189 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 CNOT8Q9UFF9 292 aaKnown RBP12.88□□□□□ -0.35
VRK3-202ENST00000377011 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
VRK3-202ENST00000377011 OTOL1A6NHN0 477 aaPredicted RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 HHLA1C9JL84 531 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 SCAMP3O14828 347 aaKnown RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 CYP26A1O43174 497 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 AP1G2O75843 785 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 ECEL1O95672 775 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 PYGMP11217 842 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 GLULP15104 373 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 GDI1P31150 447 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 SOX9P48436 509 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 MAP3K7CLP57077 242 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 BPIFB4P59827 614 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 TNK2Q07912 1038 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 TAF10Q12962 218 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 SIX1Q15475 284 aaPredicted RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 TAF12Q16514 161 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 LACTB2Q53H82 288 aaPredicted RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 WDR44Q5JSH3 913 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 VSTM1Q6UX27 236 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 CLEC20AQ6ZU45 233 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 DENND5BQ6ZUT9 1274 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 CCDC91Q7Z6B0 441 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 DDX1Q92499 740 aaKnown RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 CHMP6Q96FZ7 201 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 TRMT2BQ96GJ1 504 aaKnown RBP12.87□□□□□ -0.35
VRK3-202ENST00000377011 SPATA17Q96L03 361 aa12.87□□□□□ -0.35
VRK3-202ENST00000377011 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms