RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TPMTP51580 245 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 COPAP53621 1224 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 TBX4P57082 545 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 SEMA3BQ13214 749 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 FNDC3BQ53EP0 1204 aaKnown RBP21.9■■□□□ 1.1
VSX1-201ENST00000376707 CHST9Q7L1S5 443 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 SRRTQ9BXP5 876 aaKnown RBP21.9■■□□□ 1.1
VSX1-201ENST00000376707 INTS2Q9H0H0 1204 aaKnown RBP21.9■■□□□ 1.1
VSX1-201ENST00000376707 GGA2Q9UJY4 613 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 KCNJ18B7U540 433 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 IGLV3-27P01718 113 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 KRT5P13647 590 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 HLA-EP13747 358 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 MAOBP27338 520 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 RING1Q06587 406 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 RFWD3Q6PCD5 774 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 AHI1Q8N157 1196 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.89■■□□□ 1.09
VSX1-201ENST00000376707 CADM4Q8NFZ8 388 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 CYB5D2Q8WUJ1 264 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 KREMEN1Q96MU8 473 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 ST7Q9NRC1 585 aa21.89■■□□□ 1.09
VSX1-201ENST00000376707 GON4LQ3T8J9 2241 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 GOLGA6L7A0A1B0GV03 622 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 UPK3BL1B0FP48 263 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 UPK3BL2E5RIL1 263 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 IRAK2O43187 625 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 SART1O43290 800 aaKnown RBP21.88■■□□□ 1.09
VSX1-201ENST00000376707 ACSL4O60488 711 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 TBL1XO60907 577 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 FGFR1OPO95684 399 aaKnown RBP21.88■■□□□ 1.09
VSX1-201ENST00000376707 PABPC1P11940 636 aaKnown RBP21.88■■□□□ 1.09
VSX1-201ENST00000376707 SGSHP51688 502 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 CAMK4Q16566 473 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 MPP7Q5T2T1 576 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 PIK3R6Q5UE93 754 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 PIP4P1Q86T03 277 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 OR2I1PQ8NGU4 316 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 OR2T3Q8NH03 318 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 NUP58Q9BVL2 599 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 IRX2Q9BZI1 471 aaPredicted RBP21.88■■□□□ 1.09
VSX1-201ENST00000376707 RWDD2AQ9UIY3 292 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 NFE2L3Q9Y4A8 694 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 CACNA1BQ00975 2339 aa21.88■■□□□ 1.09
VSX1-201ENST00000376707 CEP192Q8TEP8 1941 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 IGLV3-19P01714 112 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 ATP5BP06576 529 aaKnown RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 CAMK2GQ13555 558 aaPredicted RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 FAM133BQ5BKY9 247 aaKnown RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 MBLAC2Q68D91 279 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 ADIPOR2Q86V24 386 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 SCUBE3Q8IX30 993 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 ZNF557Q8N988 423 aaPredicted RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 DNASE2BQ8WZ79 361 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 AZIN2Q96A70 460 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 FAM149B1Q96BN6 582 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 SERPINB11Q96P15 392 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 DDX50Q9BQ39 737 aaKnown RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 MIR1-1HGQ9H1L0 117 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 TMEM245Q9H330 911 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 UBE2TQ9NPD8 197 aaPredicted RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 DNAAF2Q9NVR5 837 aaKnown RBP21.87■■□□□ 1.09
VSX1-201ENST00000376707 STIM2Q9P246 746 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 CNTN6Q9UQ52 1028 aa21.87■■□□□ 1.09
VSX1-201ENST00000376707 A0A1B0GTW7 788 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 TYW5A2RUC4 315 aaKnown RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 MED7O43513 233 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 DLDP09622 509 aaKnown RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 POLR2EP19388 210 aaKnown RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 SPINK2P20155 84 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 SLC6A4P31645 630 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 GPD2P43304 727 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 ACADSBP45954 432 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 SIM1P81133 766 aaPredicted RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 DCAF12L1Q5VU92 463 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 KIAA0907Q7Z7F0 614 aaPredicted RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 FAM124AQ86V42 546 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 MFN1Q8IWA4 741 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 ZCCHC9Q8N567 271 aaKnown RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 ZNF366Q8N895 744 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 HJURPQ8NCD3 748 aaPredicted RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 DQX1Q8TE96 717 aaKnown RBP21.86■■□□□ 1.09
VSX1-201ENST00000376707 MED15Q96RN5 788 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 LHX5Q9H2C1 402 aa21.86■■□□□ 1.09
VSX1-201ENST00000376707 MAP1BP46821 2468 aaKnown RBP21.85■■□□□ 1.09
VSX1-201ENST00000376707 SPAARA0A1B0GVQ0 90 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 LETM1O95202 739 aaPredicted RBP21.85■■□□□ 1.09
VSX1-201ENST00000376707 FYNP06241 537 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 CD70P32970 193 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 RPL34P49207 117 aaKnown RBP21.85■■□□□ 1.09
VSX1-201ENST00000376707 PTPRNQ16849 979 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 DENND1BQ6P3S1 775 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 WFDC5Q8TCV5 224 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 FCRL2Q96LA5 508 aaPredicted RBP21.85■■□□□ 1.09
VSX1-201ENST00000376707 TRIM62Q9BVG3 475 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 ZDHHC5Q9C0B5 715 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 FBRSQ9HAH7 460 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 WASF3Q9UPY6 502 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 NAALADL1Q9UQQ1 740 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 TLR6Q9Y2C9 796 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms