RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 CER1O95813 267 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 IGLV3-19P01714 112 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 ATP5BP06576 529 aaKnown RBP19.26■□□□□ 0.67
HDAC6-202ENST00000376610 HLA-EP13747 358 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 HLA-FP30511 346 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 PPP1R2P41236 205 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 SLC11A2P49281 568 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 FMO5P49326 533 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 PMS1P54277 932 aaKnown RBP19.26■□□□□ 0.67
HDAC6-202ENST00000376610 DAOAP59103 153 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 NUGGCQ68CJ6 796 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 TMEM215Q68D42 235 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 LCLAT1Q6UWP7 414 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 CHST9Q7L1S5 443 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 FAM124AQ86V42 546 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 NAXDQ8IW45 347 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 AHI1Q8N157 1196 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 IRGQQ8WZA9 623 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 TMEM121BQ9BXQ6 578 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-202ENST00000376610 IRX2Q9BZI1 471 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-202ENST00000376610 ABCB8Q9NUT2 735 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 GGA2Q9UJY4 613 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 KLK13Q9UKR3 277 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 AKAP13Q12802 2813 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 TYW5A2RUC4 315 aaKnown RBP19.25■□□□□ 0.67
HDAC6-202ENST00000376610 M0QYV0 167 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 MSI1O43347 362 aaKnown RBP19.25■□□□□ 0.67
HDAC6-202ENST00000376610 GJB3O75712 270 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 RGS7P49802 495 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 CAMK2GQ13555 558 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-202ENST00000376610 PPM1KQ8N3J5 372 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 UBR7Q8N806 425 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 RBBP8NLQ8NC74 664 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-202ENST00000376610 CYB5D2Q8WUJ1 264 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 SNX19Q92543 992 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 DHTKD1Q96HY7 919 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-202ENST00000376610 CEP63Q96MT8 703 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 EIF2B4Q9UI10 523 aaKnown RBP19.25■□□□□ 0.67
HDAC6-202ENST00000376610 KNL1Q8NG31 2342 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 CACNA1GO43497 2377 aa19.25■□□□□ 0.67
HDAC6-202ENST00000376610 IRAK2O43187 625 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 FBXO21O94952 628 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 PABPC1P11940 636 aaKnown RBP19.24■□□□□ 0.67
HDAC6-202ENST00000376610 POLR2EP19388 210 aaKnown RBP19.24■□□□□ 0.67
HDAC6-202ENST00000376610 MATKP42679 507 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 FAM193AP78312 1265 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 CNGA2Q16280 664 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 PKDCCQ504Y2 493 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 MSANTD2Q6P1R3 559 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 CCDC117Q8IWD4 279 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-202ENST00000376610 CHCHD4Q8N4Q1 142 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.24■□□□□ 0.67
HDAC6-202ENST00000376610 SPATA20Q8TB22 786 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 ERCC4Q92889 916 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-202ENST00000376610 TIGD1Q96MW7 591 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 DDX50Q9BQ39 737 aaKnown RBP19.24■□□□□ 0.67
HDAC6-202ENST00000376610 GAREM1Q9H706 876 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 PKD1L2Q7Z442 2459 aa19.24■□□□□ 0.67
HDAC6-202ENST00000376610 PMM2O15305 246 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 TBL1XO60907 577 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 LTFP02788 710 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 DNTTP04053 509 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 DLDP09622 509 aaKnown RBP19.23■□□□□ 0.67
HDAC6-202ENST00000376610 TBX4P57082 545 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 ZBTB16Q05516 673 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 TTC31Q49AM3 519 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-202ENST00000376610 MPP7Q5T2T1 576 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 MBLAC2Q68D91 279 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 PMF1Q6P1K2 205 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 ENGASEQ8NFI3 743 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 SETD7Q8WTS6 366 aaKnown RBP19.23■□□□□ 0.67
HDAC6-202ENST00000376610 SLC35F5Q8WV83 523 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 HSFY1Q96LI6 401 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 CAMK1GQ96NX5 476 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 TMEM245Q9H330 911 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 SUN2Q9UH99 717 aa19.23■□□□□ 0.67
HDAC6-202ENST00000376610 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.23■□□□□ 0.67
HDAC6-202ENST00000376610 APOBEC2Q9Y235 224 aaKnown RBP19.23■□□□□ 0.67
HDAC6-202ENST00000376610 NUMA1Q14980 2115 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 PIK3R2O00459 728 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 P4HA2O15460 535 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 FTH1P19P0C7X4 201 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 ZNF883P0CG24 379 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 AFF3P51826 1226 aaKnown RBP19.22■□□□□ 0.67
HDAC6-202ENST00000376610 ST8SIA6P61647 398 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 NUCB2P80303 420 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 RING1Q06587 406 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 BECN1Q14457 450 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 TEAD4Q15561 434 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 RAB44Q7Z6P3 723 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-202ENST00000376610 ADIPOR2Q86V24 386 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 MFN1Q8IWA4 741 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 ZNF366Q8N895 744 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 HJURPQ8NCD3 748 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-202ENST00000376610 TFAP2BQ92481 460 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 BTBD1Q9H0C5 482 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 ZFYVE26Q68DK2 2539 aa19.22■□□□□ 0.67
HDAC6-202ENST00000376610 ANKRD11Q6UB99 2663 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-202ENST00000376610 CABIN1Q9Y6J0 2220 aa19.21■□□□□ 0.67
HDAC6-202ENST00000376610 BICDL2A1A5D9 508 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms