RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 MCM8Q9UJA3 840 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 VAPBO95292 243 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 UBTFL6P0CB48 400 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 USP4Q13107 963 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 DUSP28Q4G0W2 176 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 C10orf120Q5SQS8 335 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 TMCO4Q5TGY1 634 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 PDZD4Q76G19 769 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 BLOC1S5Q8TDH9 187 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 SEC14L1Q92503 715 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 KCTD15Q96SI1 283 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 UTP6Q9NYH9 597 aaKnown RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 CD4P01730 458 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 ZCCHC18P0CG32 403 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 ENO3P13929 434 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 GRK4P32298 578 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 UBAP2LQ14157 1087 aaKnown RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 ANKRD20A2Q5SQ80 823 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 ANKRD20A1Q5TYW2 823 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 CFAP52Q8N1V2 620 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 RAET1EQ8TD07 263 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 RMDN1Q96DB5 314 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 MFSD3Q96ES6 412 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 PRR11Q96HE9 360 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 MAGEB18Q96M61 343 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 VPS33BQ9H267 617 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 NT5MQ9NPB1 228 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 C15orf41Q9Y2V0 281 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 PPP2R3BQ9Y5P8 575 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 MYH9P35579 1960 aaKnown RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 COL22A1Q8NFW1 1626 aaPredicted RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 C9JVG2 144 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 NRP1O14786 923 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 ADCY6O43306 1168 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 GNAT1P11488 350 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 STIP1P31948 543 aaKnown RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 CCL23P55773 120 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 MMEL1Q495T6 779 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
DDR1-227ENST00000376570 TMEM209Q96SK2 561 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
DDR1-227ENST00000376570 GAS2O43903 313 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 GPC4O75487 556 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SPATA31D3P0C874 917 aa12□□□□□ -0.49
DDR1-227ENST00000376570 DARSP14868 501 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 PMLP29590 882 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SLC26A2P50443 739 aa12□□□□□ -0.49
DDR1-227ENST00000376570 DRG2P55039 364 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 LILRA4P59901 499 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SEMG2Q02383 582 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PRPSAP1Q14558 356 aa12□□□□□ -0.49
DDR1-227ENST00000376570 TMEM154Q6P9G4 183 aa12□□□□□ -0.49
DDR1-227ENST00000376570 C15orf39Q6ZRI6 1047 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SPATA31D4Q6ZUB0 917 aa12□□□□□ -0.49
DDR1-227ENST00000376570 IFNEQ86WN2 208 aa12□□□□□ -0.49
DDR1-227ENST00000376570 ATPAF2Q8N5M1 289 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PPTC7Q8NI37 304 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PTPRN2Q92932 1015 aa12□□□□□ -0.49
DDR1-227ENST00000376570 TMA16Q96EY4 203 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 P2RY11Q96G91 374 aa12□□□□□ -0.49
DDR1-227ENST00000376570 ELMO2Q96JJ3 720 aa12□□□□□ -0.49
DDR1-227ENST00000376570 ZNF512Q96ME7 567 aaPredicted RBP12□□□□□ -0.49
DDR1-227ENST00000376570 CSPG4P5Q96PW8 444 aa12□□□□□ -0.49
DDR1-227ENST00000376570 FICDQ9BVA6 458 aa12□□□□□ -0.49
DDR1-227ENST00000376570 ADAM7Q9H2U9 754 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SYBUQ9NX95 663 aa12□□□□□ -0.49
DDR1-227ENST00000376570 OR12D3Q9UGF7 316 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PLA2G4CQ9UP65 541 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SHOC2Q9UQ13 582 aa12□□□□□ -0.49
DDR1-227ENST00000376570 CFAP73A6NFT4 308 aa12□□□□□ -0.49
DDR1-227ENST00000376570 GLTPD2A6NH11 291 aa12□□□□□ -0.49
DDR1-227ENST00000376570 C2CD4BA6NLJ0 364 aa12□□□□□ -0.49
DDR1-227ENST00000376570 ZBTB42B2RXF5 422 aa12□□□□□ -0.49
DDR1-227ENST00000376570 RPL17P18621 184 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 CCNHP51946 323 aaPredicted RBP12□□□□□ -0.49
DDR1-227ENST00000376570 HDAC4P56524 1084 aa12□□□□□ -0.49
DDR1-227ENST00000376570 BST1Q10588 318 aa12□□□□□ -0.49
DDR1-227ENST00000376570 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 OSTM1Q86WC4 334 aa12□□□□□ -0.49
DDR1-227ENST00000376570 AGAP2Q99490 1192 aa12□□□□□ -0.49
DDR1-227ENST00000376570 TRIM4Q9C037 500 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PIF1Q9H611 641 aa12□□□□□ -0.49
DDR1-227ENST00000376570 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SOCS7O14512 581 aa12□□□□□ -0.49
DDR1-227ENST00000376570 TPP1O14773 563 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PQBP1O60828 265 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 DCTN3O75935 186 aa12□□□□□ -0.49
DDR1-227ENST00000376570 PAEPP09466 180 aa12□□□□□ -0.49
DDR1-227ENST00000376570 CSH1P0DML2 217 aa12□□□□□ -0.49
DDR1-227ENST00000376570 CSH2P0DML3 217 aa12□□□□□ -0.49
DDR1-227ENST00000376570 NFKB1P19838 968 aa12□□□□□ -0.49
DDR1-227ENST00000376570 IVDP26440 423 aa12□□□□□ -0.49
DDR1-227ENST00000376570 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
DDR1-227ENST00000376570 EFHC1Q5JVL4 640 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms