RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 MTRRQ9UBK8 725 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 NOVA2Q9UNW9 492 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 GREB1Q4ZG55 1949 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 SMIM23A6NLE4 172 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 RASGRF2O14827 1237 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 CHADO15335 359 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 RTN3O95197 1032 aaPredicted RBP18.25■□□□□ 0.51
CTTN-203ENST00000376561 VAV1P15498 845 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 NR1D1P20393 614 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 CCR1P32246 355 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 PDK1Q15118 436 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 FNBP1LQ5T0N5 605 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 C6orf118Q5T5N4 469 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 SLC8B1Q6J4K2 584 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 C4orf22Q6V702 233 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 ZBED8Q8IZ13 594 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 HTR3CQ8WXA8 447 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 SPATA17Q96L03 361 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 TTC25Q96NG3 672 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 WDR27A2RRH5 827 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 C5orf60A6NFR6 353 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 ADAM12O43184 909 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 PRKD1Q15139 912 aaPredicted RBP18.25■□□□□ 0.51
CTTN-203ENST00000376561 SKIDA1Q1XH10 827 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 HP1BP3Q5SSJ5 553 aaPredicted RBP18.25■□□□□ 0.51
CTTN-203ENST00000376561 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
CTTN-203ENST00000376561 FAM117BQ6P1L5 589 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 MSANTD2Q6P1R3 559 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 NECAB2Q7Z6G3 386 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 FBXO32Q969P5 355 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 SERPINB11Q96P15 392 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 HAPLN3Q96S86 360 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 KLC2Q9H0B6 622 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 PRDM12Q9H4Q4 367 aa18.25■□□□□ 0.51
CTTN-203ENST00000376561 RC3H2Q9HBD1 1191 aaKnown RBP18.25■□□□□ 0.51
CTTN-203ENST00000376561 E7ESA3 106 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 KIAA0355O15063 1070 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 ABHD2P08910 425 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 RAG1P15918 1043 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 EPHB2P29323 1055 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 SLCO1A2P46721 670 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 PPP2R5DQ14738 602 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 PSMD5Q16401 504 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 MSS51Q4VC12 460 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 EMC10Q5UCC4 262 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 PDZD4Q76G19 769 aaPredicted RBP18.24■□□□□ 0.51
CTTN-203ENST00000376561 TP53INP2Q8IXH6 220 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 BACE2Q9Y5Z0 518 aa18.24■□□□□ 0.51
CTTN-203ENST00000376561 PPP1R12AO14974 1030 aaPredicted RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 EIF3HO15372 352 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTTN-203ENST00000376561 BANF1O75531 89 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 RPL17P18621 184 aaKnown RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 LMAN1P49257 510 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 GLUD2P49448 558 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 LBX1P52954 281 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 WDR5P61964 334 aaKnown RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 AP1B1Q10567 949 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 LONRF1Q17RB8 773 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 SYCP2LQ5T4T6 812 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 FAXCQ5TGI0 409 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 KIAA1841Q6NSI8 718 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 KDM7AQ6ZMT4 941 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 CCDC13Q8IYE1 715 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 PDIK1LQ8N165 341 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 TLCD1Q96CP7 247 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 SIK2Q9H0K1 926 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 ETNK1Q9HBU6 452 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 RAD54BQ9Y620 910 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 PAGE1O75459 146 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 METTL18O95568 372 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 OR1D2P34982 312 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 MAGEA6P43360 314 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 MAGOHP61326 146 aaKnown RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 RPL10AP62906 217 aaKnown RBP18.23■□□□□ 0.51
CTTN-203ENST00000376561 SKOR1P84550 965 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 TAF10Q12962 218 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 MFSD5Q6N075 450 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 VPS52Q8N1B4 723 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 NPWQ8N729 165 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 CCNYQ8ND76 341 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 P2RY11Q96G91 374 aa18.23■□□□□ 0.51
CTTN-203ENST00000376561 C2CD2LO14523 706 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 EFCAB14O75071 495 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 TCEA3O75764 348 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 SOD2P04179 222 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 HPDP32754 393 aaPredicted RBP18.22■□□□□ 0.51
CTTN-203ENST00000376561 ATP1A2P50993 1020 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 C1QTNF8P60827 252 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 AUHQ13825 339 aaKnown RBP18.22■□□□□ 0.51
CTTN-203ENST00000376561 ANKMY2Q8IV38 441 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 SLC39A11Q8N1S5 342 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ZNF558Q96NG5 402 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 TLR8Q9NR97 1041 aaKnown RBP18.22■□□□□ 0.51
CTTN-203ENST00000376561 TMEM51Q9NW97 253 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 COMMD8Q9NX08 183 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 CLIC5Q9NZA1 410 aa18.22■□□□□ 0.51
CTTN-203ENST00000376561 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms